Job Description P77366 Confidence 99.10% Date Thu Jan 5 12:28:14 GMT 2012 Rank 84 Aligned Residues 204 % Identity 11% Template c3fvvA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein with unknown function from2 bordetella pertussis tohama i Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	Q	G	V	I	F	D	L	D	G	V	I	T	D	T	A	H	L	H	F	Q	A	W	Q	Q	I	A	A	E	I	G	I	S	I	D	A	Q	F	N	E	S	L	K	G	I	S	R	D	E	S	L	R	R	I	L	Q	H	G	G	K	E	G	D	F	N	S	Q	E	R	A	Q	L	A	Y	R	K	N	L	L
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		T	R	R	L	A	L	F	D	L	D	H	T	L	L	P	L	D	S	D	Y	.	.	Q	W	A	D	F	L	A	R	T	G	R	A	G	D	P	A	E	A	R	R	R	N	D	D	L	M	E	R	Y	N	R	G	E	L	T	A	E	Q	A	A	E	F	M	L	G	L	L	A	A	H	S	P	V	E	L	A	A	W
Template Known Secondary structure											B	T	T	T	B	S	S					.	.									T	T	S	S	S	S																		T		S															T	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	H	S	L	R	E	L	T	V	N	A	V	L	P	G	I	R	S	L	L	A	D	L	R	A	Q	Q	I	S	V	G	L	A	S	V	S	L	N	A	P	T	I	L	A	A	L	E	L	R	E	F	F	T	F	C	A	D	A	S	Q	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	E	E	F	M	R	D	V	I	R	P	S	L	T	V	Q	A	V	D	V	V	R	G	H	L	A	A	G	D	L	C	A	L	V	T	A	T	N	S	F	V	T	A	P	I	A	R	A	F	G	V	Q	H	L	I	A	T	D	P	E	Y	R	D	G	R	Y	T	G	R	I	E	G	T	P	S	F	R	E	G	K
Template Known Secondary structure									T	T	G	G	G															T	T								S	S												T	T													T	T								S	S		S	S	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	D	P	E	I	F	L	A	A	C	A	G	L	G	V	P	P	Q	A	C	I	G	I	E	D	A	Q	A	G	I	D	A	I	N	A	S	G	M	R	S	V	G	I	G	A	G	L	T	G	A	Q	L	L	L	P	S	T	E	S	L	T
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		V	V	R	V	N	Q	W	L	A	G	M	G	L	A	L	G	D	F	A	E	S	Y	F	Y	S	D	S	V	N	D	V	P	L	L	E	A	V	T	R	.	P	I	A	A	N	P	S	P	G	L	R	E	I	A	Q	A	R	G	W	Q	V	I
Template Known Secondary structure												T	T			G	G	G	S	S									G	G	G							S	S		.					S													T
Template Predicted Secondary structure																																									.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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