Job Description P77366 Confidence 99.88% Date Thu Jan 5 12:28:14 GMT 2012 Rank 38 Aligned Residues 216 % Identity 15% Template c3ed5A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:yfnb; PDBTitle: the crystal structure of yfnb from bacillus subtilis subsp. subtilis2 str. 168 Resolution 1.72 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		K	L	Q	G	V	I	F	D	L	D	G	V	I	T	D	T	A	H	L	H	F	Q	A	W	Q	Q	I	A	A	E	I	G	I	S	I	D	A	Q	F	N	E	S	L	K	G	I	S	R	D	E	S	L	R	R	I	L	Q	H	G	G	K	E	G	D	F	N	S	Q	E	R	A	Q	L	A	Y	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																																																													.	.	.	.	.
Template Conservation
Template Sequence		R	Y	R	T	L	L	F	D	V	D	D	T	I	L	D	F	Q	A	A	E	A	L	A	L	R	L	L	F	E	D	Q	N	I	P	L	T	N	D	X	K	A	Q	Y	K	T	I	N	Q	G	L	W	R	A	F	E	E	G	K	X	T	R	D	E	V	V	N	T	R	F	S	A	L	L	K	E	Y	G	Y	E	A
Template Known Secondary structure											B	T	T	T	B																	T	T																								T	T	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
			77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.																																															.
Query SS confidence		.																																															.
Query Sequence		.	R	K	N	L	L	Y	V	H	S	L	R	E	L	T	V	N	A	V	L	P	G	I	R	S	L	L	A	D	L	R	A	Q	Q	I	S	V	G	L	A	S	V	S	L	N	A	P	.	T	I	L	A	A	L	E	L	R	E	F	F	T	F	C	A	D	A	S	Q	L	K	N	S	K	P	D	P	E	I	F	L
Query Conservation		.																																															.
Alig confidence		.																																															.
Template Conservation
Template Sequence		D	G	A	L	L	E	Q	K	Y	R	R	F	L	E	E	G	H	Q	L	I	D	G	A	F	D	L	I	S	N	L	Q	Q	Q	F	D	L	Y	I	V	T	N	G	V	S	H	T	Q	Y	K	R	L	R	D	S	G	L	F	P	F	F	K	D	I	F	V	S	E	D	T	G	F	Q	K	P	X	K	E	Y	F	N
Template Known Secondary structure															T	T				B		T	T										T	T	S								S												T	T		G	G	G		S					G	G	G	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		155	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.															.
Query SS confidence								.															.
Query Sequence		A	A	C	A	G	L	.	G	V	P	P	Q	A	C	I	G	I	E	D	A	Q	.	A	G	I	D	A	I	N	A	S	G	M	R	S	V	G	I	G	A	G	L	T	G	A	Q	L	L	L	P	S	T	E	S	L	T	W	P	R	L	S	A	F	W	Q	N	V
Query Conservation								.															.
Alig confidence								.															.																										.	.
Template Conservation																																																	.	.
Template Sequence		Y	V	F	E	R	I	P	Q	F	S	A	E	H	T	L	I	I	G	D	S	L	T	A	D	I	K	G	G	Q	L	A	G	L	D	T	C	W	X	N	P	D	X	K	P	N	V	P	.	.	E	I	I	P	T	Y	E	I	R	K	L	E	E	L	Y	H	I	L
Template Known Secondary structure						T	S	T	T			G	G	G						S		T	T	T	T							T	T								T	T					T	T	.	.					S				S	S	G	G	G
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions