Job Description P77366 Confidence 99.16% Date Thu Jan 5 12:28:14 GMT 2012 Rank 81 Aligned Residues 183 % Identity 11% Template c2i7dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:5'(3')-deoxyribonucleotidase, cytosolic type; PDBTitle: structure of human cytosolic deoxyribonucleotidase in2 complex with deoxyuridine, alf4 and mg2+ Resolution 1.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	Q	G	V	I	F	D	L	D	G	V	I	T	D	T	A	H	L	H	F	Q	A	W	Q	Q	I	A	A	E	I	G	I	S	I	D	A	Q	F	N	E	S	L	K	G	I	S	R	D	E	S	L	R	R	I	L	Q	H	G	G	K	E	G	D	F	N	S	Q	E	R	A	Q	L	A	Y	R	K	N	L
Query Conservation
Alig confidence				.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	.	.	.	V	L	V	D	M	D	G	V	L	A	D	F	E	A	G	L	L	R	G	F	R	R	R	F	P	E	E	P	H	V	P	L	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	G	F	L	A	R	E	Q	Y	R	A	L	R	P	D	L	A	D	K	V	A
Template Known Secondary structure				.	.	.					S	B	T	T	T	B														S	T	T	S					G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S											T	T
Template Predicted Secondary structure				.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.				.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																													.												.	.
Query SS confidence																													.												.	.
Query Sequence		L	Y	V	H	S	L	R	E	L	T	V	N	A	V	L	P	G	I	R	S	L	L	A	D	L	R	A	.	Q	Q	I	S	V	G	L	A	S	V	S	.	.	L	N	A	P	T	I	L	A	A	L	E	L	R	E	F	F	T	F	C	A	D	A	S	Q	L	K	N	S	K	P	D	P	E	I	F	L	A	A	C
Query Conservation																													.												.	.
Alig confidence																													.												.	.																																	.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		S	V	Y	E	A	P	G	F	F	L	D	L	E	P	I	P	G	A	L	D	A	V	R	E	M	N	D	L	P	D	T	Q	V	F	I	C	T	S	P	L	L	K	Y	H	H	C	V	G	E	K	Y	R	W	V	E	Q	H	L	G	P	Q	F	V	E	R	I	I	L	T	R	D	K	T	.	.	.	.	.	.	.
Template Known Secondary structure					T	S	T	T	T	T	T	T			B		T	T											S	T	T											S	S		T	T	T																		T	T					S		G	G	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	G	V	P	P	Q	A	C	I	G	I	E	D	A	Q	A	G	I	D	A	I	N	A	S	G	M	R	S	V	G	I	G	A	G	L	T	G	A	Q	L	L	L	P	S	T	E	S	L	T	W	P	R	L	S	A	F	W	Q	N	V
Query Conservation
Alig confidence		.	.	.						.	.																															.	.
Template Conservation		.	.	.						.	.																															.	.
Template Sequence		.	.	.	V	V	L	G	D	.	.	L	L	I	D	D	K	D	T	V	R	G	Q	E	E	T	P	S	W	E	H	I	L	F	T	C	C	H	N	R	H	.	.	L	V	L	P	P	T	R	R	R	L	L	S	W	S	D	N	W	R	E	I
Template Known Secondary structure		.	.	.	G	S			S	.	.						S	S				S	S		S	S		S	S								G	G	G	T	T	.	.					T	T	S						T	T	S
Template Predicted Secondary structure		.	.	.						.	.																															.	.
Template SS confidence
					136	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions