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51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
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. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . |
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Query SS confidence |   |
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Query Sequence |   |
S | A | E | M | M | Q | A | R | R | A | F | L | D | A | G | H | . |
. |
. |
Y | Q | P | L | R | D | A | I | V | A | Q | L | R | E | R | L | D | D | K | A | T | A | V | L | D | I | G | C | G | E | G | Y | Y | T | H | A | F | A | D | A | L | P | E | I | T | T | F | G | L | D | V | S | K | V | A | I | K | A | A | A | K |
Query Conservation |   |
  |   |   |   |   |   |
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|   | . | . | . |
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|   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |
Alig confidence |   |
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Template Conservation |   |
  |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
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|   |   | . | . |   |   |   |
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Template Sequence |   |
S | W | E | F | Y | D | R | I | A | R | A | Y | D | S | X | Y | E | T | P | K | W | K | L | Y | H | R | L | I | G | S | F | L | E | E | Y | L | K | N | P | C | R | V | L | D | L | G | G | G | T | G | K | W | S | L | F | L | Q | E | R | . |
. |
G | F | E | V | V | L | V | D | P | S | K | E | X | L | E | V | A | R | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| S |
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|  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  | T | T | . | . | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
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. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
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. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
R | Y | P | Q | V | T | F | C | V | A | S | S | H | R | L | P | F | S | D | T | S | M | D | A | I | I | R | I | . |
. |
. |
. |
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. |
. |
Y | A | P | C | K | A | E | E | L | A | R | V | V | K | P | G | G | W | V | I | T | A | T | P | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
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|   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
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|   |
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|   |
Alig confidence |   |
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| . |
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| . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
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|   |
|   |   |   |   |   |   |
Template Sequence |   |
K | G | V | K | N | . |
V | V | E | A | K | A | E | D | L | P | F | P | S | G | A | F | E | A | V | L | A | L | G | D | V | L | S | Y | V | E | N | K | D | K | A | F | S | E | I | R | R | V | L | V | P | D | G | L | L | I | A | T | V | D | N |
Template Known Secondary structure |   |
 | T |
| S |
| . |  |  |  |
|
| T | T | S |
|
| S |
| T | T |
|  |  |  |  |  |  |
| S | S |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | B |
Template Predicted Secondary structure |   |
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| . |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
83 | . | . | . | . | |
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |