Return to main results Retrieve Phyre Job Id

Job DescriptionP36999
Confidence99.45%DateThu Jan 5 11:54:09 GMT 2012
Rank103Aligned Residues152
% Identity23%Templatec3sm3A_
PDB info PDB header:transferaseChain: A: PDB Molecule:sam-dependent methyltransferases; PDBTitle: crystal structure of sam-dependent methyltransferases q8puk2_metma2 from methanosarcina mazei. northeast structural genomics consortium3 target mar262.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.. .......140.......
Predicted Secondary structure 























..........








Query SS confidence 






















































. . . . . . . . . .














Query Sequence  LRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQV. . . . . . . . . . TFCVASSHRLPFSDT
Query Conservation 
          






 
     
            
 
      
       ..........         

  
 
Alig confidence 





.





















..























..........














Template Conservation 
   
 .    






 
     
   ..   
 


 
      
                                
Template Sequence  IHNYLQ. EDDEILDIGCGSGKISLELASK. . GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDS
Template Known Secondary structure 

.TT
T
TTST..T
S
TT

S

SSSS


TTS

S
TT
Template Predicted Secondary structure 

.







..



























Template SS confidence 















































































   24..... 30.........40.........50. ........60.........70.........80.........90.........100
 
   148.150.........160 .........170.........180.........190.........200.........210.......
Predicted Secondary structure 

..........


























Query SS confidence 












. . . . . . . . . .
























































Query Sequence  SMDAIIRIYAPCK. . . . . . . . . . AEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELC
Query Conservation 


 
        ..........  
  






 

   
      


                   
       
 
Alig confidence 












..........
























































Template Conservation                                




   
                                         
Template Sequence  SFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEF
Template Known Secondary structure 
S
GGG


B

TTS
STT
TTT

Template Predicted Secondary structure 







































Template SS confidence 















































































   101........110.........120.........130.........140.........150.........160.........170.........180
 
   218.220.........230..
Predicted Secondary structure 

Query SS confidence 














Query Sequence  YPMRLRGDEAVALLQ
Query Conservation      
       
  
Alig confidence 














Template Conservation       
   
   
 
Template Sequence  IAHHFTEKELVFLLT
Template Known Secondary structure 
B
Template Predicted Secondary structure 



Template SS confidence 














   181........190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions