Job Description P36999 Confidence 96.76% Date Thu Jan 5 11:54:09 GMT 2012 Rank 308 Aligned Residues 113 % Identity 12% Template c3s1sA_ PDB info PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi Resolution 2.35 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.													.
Predicted Secondary structure																																											.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	L	R	D	A	I	V	A	Q	L	R	E	R	L	D	D	K	A	T	A	V	L	D	I	G	C	G	E	G	Y	Y	T	H	A	F	A	D	A	L	P	.	.	.	E	I	T	T	F	G	L	D	V	S	K	V	A	I	K	A	A	A	K	R	Y	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	V
Query Conservation																																											.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	V	L	S	I	I	S	Q	H	I	L	G	R	P	L	T	E	D	E	V	I	S	D	P	A	A	G	S	G	N	L	L	A	T	V	S	A	G	F	N	N	V	X	P	R	Q	I	W	A	N	D	I	E	T	L	F	L	E	L	L	S	I	R	L	G	L	L	F	P	Q	L	V	S	S	N	N	A	P	T
Template Known Secondary structure															S				T	T						T	T		T	T	S									T	S	T	T			G	G	G						S		G	G	G										T	T	S	T	T	T		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																																					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	C	V	A	S	S	H	R	L	P	F	S	D	T	S	M	D	A	I	I	R	I	Y	A	P	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	E	E	L	A	R	V	V	K	P	G	G	W	V	I	T
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	G	E	D	V	C	S	L	N	P	E	D	F	A	N	V	S	V	V	V	X	N	P	P	Y	V	S	G	V	T	D	P	A	I	K	R	K	F	A	H	K	I	I	Q	L	T	G	N	R	P	Q	T	L	F	G	Q	I	G	V	E	A	L	F	L	E	L	V	T	E	L	V	Q	D	G	T	V	I	S	A
Template Known Secondary structure							G	G	G			G	G	G	G	T	T									B			S	S																			S	S			S	S		S	S	S															S		T	T
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
		177	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	X	P	K
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		464	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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