Job Description P36999 Confidence 99.55% Date Thu Jan 5 11:54:09 GMT 2012 Rank 67 Aligned Residues 176 % Identity 19% Template c3ocjA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis Resolution 1.39 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																		.																												.	.	.	.	.	.
Query SS confidence																																		.																												.	.	.	.	.	.
Query Sequence		A	I	V	A	Q	L	R	E	R	L	D	D	K	A	T	A	V	L	D	I	G	C	G	E	G	Y	Y	T	H	A	F	A	.	D	A	L	P	E	I	T	T	F	G	L	D	V	S	K	V	A	I	K	A	A	A	K	R	Y	P	Q	.	.	.	.	.	.	V	T	F	C	V	A	S	S	H	R	L	P	F	S
Query Conservation																																		.																												.	.	.	.	.	.
Alig confidence																																		.																												.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	F	R	R	A	L	Q	R	H	L	R	P	G	C	V	V	A	S	V	P	C	G	W	X	S	E	L	L	A	L	D	Y	S	A	C	P	G	V	Q	L	V	G	I	D	Y	D	P	E	A	L	D	G	A	T	R	L	A	A	G	H	A	L	A	G	Q	I	T	L	H	R	Q	D	A	W	K	L	D	T	R
Template Known Secondary structure														T	T						T	T		T	T						T	S			T	T		T	T								S													T	T	S	T	T	G	G	G								G	G	G
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160											.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	S	M	D	A	I	I	R	I	Y	A	P	C	K	.	.	.	.	.	.	.	.	.	.	A	E	E	L	A	R	V	V	K	P	G	G	W	V	I	T	A	T	P	G	P	R	H	L	M	E	L	K	G	L	I	Y	N	E	V	H	L	H	A	P	H	A	E	Q	L	E	G	F	T	L	Q	Q	S	A	E
Query Conservation																	.	.	.	.	.	.	.	.	.	.
Alig confidence				.													.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.
Template Conservation				.																																																																								.	.	.	.	.	.
Template Sequence		E	G	.	Y	D	L	L	T	S	N	G	L	N	I	Y	E	P	D	D	A	R	V	T	E	L	Y	R	R	F	W	Q	A	L	K	P	G	G	A	L	V	T	S	F	L	T	P	P	P	A	L	S	P	D	S	P	W	D	X	Q	A	I	D	P	H	D	L	Q	L	Q	Q	L	V	F	T	.	.	.	.	.	.
Template Known Secondary structure		S		.								S	S	G	G	G																																	T	T	T		T	T					G	G	G	S														.	.	.	.	.	.
Template Predicted Secondary structure				.																																																																								.	.	.	.	.	.
Template SS confidence
		183	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.							260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		L	C	Y	P	M	R	L	R	G	D	E	A	V	A	L	L	Q	M	T	P	F	A	W	R	A	K	P	E	V	W	Q	T	L	A	A	K	E	V	F	D	C	Q	T	D	.	.	.	.	.	.	F	N	I	H	L	W	Q	R	S
Query Conservation																																														.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	I	Q	P	R	W	N	A	L	R	T	H	A	Q	T	R	A	Q	L	E	E	A	G	F	T	D	L	R	F	E	D	D	R	A	R	L	F	P	T	V	I	A	R	K	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.		T	T			S																	T	T										T	T	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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