Job Description P36999 Confidence 99.66% Date Thu Jan 5 11:54:09 GMT 2012 Rank 23 Aligned Residues 168 % Identity 18% Template c3ndjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: x-ray structure of a c-3'-methyltransferase in complex with s-2 adenosyl-l-homocysteine and sugar product Resolution 1.50 Å

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		4	.	.	.	.	.	10	.	.																					.	.	.	.	.	.						.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query Sequence		S	C	P	L	C	H	Q	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	E	K	N	S	.	.	.	.	.	Y	I	C	P	Q	R	H	Q	F	D	M	A	K	E	G	Y	V	N	L	L	P	V	Q	H	K	R	S	R	D	P	G	D	S	A	E	M	M	Q	A	R
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.																							.
Template Conservation																																																																.
Template Sequence		A	C	R	V	C	G	G	G	V	Q	E	F	L	D	L	G	R	Q	P	L	S	D	R	F	R	K	P	D	E	L	D	D	E	F	T	Y	R	L	A	V	G	R	C	D	S	C	E	M	V	Q	L	T	E	E	V	P	R	D	L	M	F	H	.	E	V	Y	P	Y	H	S	S	G	S	S	V	M	R	E	H	F
Template Known Secondary structure		B		T	T	T			B													T	T			B		T	T	S		S													T	T	T						S	S								S	S	.	T	T					G	G	G
Template Predicted Secondary structure																																																																.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		R	A	F	L	D	A	G	H	Y	Q	P	L	R	D	A	I	V	A	Q	L	R	E	R	L	D	D	K	A	T	A	V	L	D	I	G	C	G	E	G	Y	Y	T	H	A	F	A	D	A	L	P	E	I	T	T	F	G	L	D	V	S	K	V	A	I	K	A	A	A	K	R	Y	P	Q	V	T	.	.	.	F	C
Query Conservation																																																																													.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																																.	.																										.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Sequence		A	M	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	D	F	L	A	T	E	L	T	G	P	D	P	F	I	V	E	I	G	C	N	D	G	I	M	L	R	T	I	Q	E	A	.	.	G	V	R	H	L	G	F	E	P	S	S	G	V	A	A	K	A	R	E	K	G	I	R	V	R	T	D	F	F	E
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.					T	T	T		S	S	S							S		T	T	T	T	T							T	.	.	T								S										T	T	T						S			S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template SS confidence
		91	.	.	.	.													.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.								.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.
Query Sequence		V	A	S	S	H	R	L	P	F	S	D	T	S	M	D	A	I	I	R	I	Y	A	P	C	K	A	E	E	.	.	.	.	.	.	.	L	A	R	V	V	K	P	G	G	W	V	I	T	A	T	P	G	P	R	H	L	M	E
Query Conservation																														.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	T	A	D	D	V	R	R	T	E	G	P	A	N	V	I	Y	A	A	N	T	L	C	H	I	P	Y	V	Q	S	V	L	E	G	V	D	A	L	L	A	P	D	G	V	F	V	F	E	D	P	Y	L	G	D	I	V	A
Template Known Secondary structure																						S		G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions