Job Description P36999 Confidence 97.66% Date Thu Jan 5 11:54:09 GMT 2012 Rank 287 Aligned Residues 113 % Identity 16% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.								.	.	.	130
Predicted Secondary structure																			.	.	.	.	.																									.	.	.																					.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.																									.	.	.																					.	.	.	.	.	.	.
Query Sequence		H	Y	Q	P	L	R	D	A	I	V	A	Q	L	R	E	R	L	.	.	.	.	.	D	D	K	A	T	A	V	L	D	I	G	C	G	E	G	Y	Y	T	H	A	F	A	D	A	.	.	.	L	P	E	I	T	T	F	G	L	D	V	S	K	V	A	I	K	A	A	A	.	.	.	.	.	.	.	K	R	Y	P
Query Conservation																			.	.	.	.	.																									.	.	.																					.	.	.	.	.	.	.
Alig confidence						.	.												.	.	.	.	.																									.	.	.																					.	.	.	.	.	.	.
Template Conservation						.	.
Template Sequence		F	Y	T	P	.	.	Q	P	V	A	K	L	X	T	Q	I	A	F	L	G	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S	T	Y	N	L	A	R	X	N	X	I	L	H	G	V	P	I	E
Template Known Secondary structure						.	.													T	T		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S															T	T			G	G
Template Predicted Secondary structure						.	.
Template SS confidence
		199	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.																															.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.
Predicted Secondary structure																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		Q	V	T	F	C	V	A	S	S	H	R	L	P	F	S	D	T	S	.	.	.	M	D	A	I	I	R	I	Y	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	K	A	E	E	L	A	R	V	V	K	P	.	G	G	W	V	I	T
Query Conservation																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		N	Q	F	L	H	N	A	D	T	L	D	E	D	W	P	T	Q	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D	D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	A	D	F	A	F	L	L	H	G	Y	Y	H	L	K	Q	D	N	G	V	X	A	I
Template Known Secondary structure		G						S		T	T	T	S		S			S	S				B	S								B	T							G	G	G	G	G	S	T	T	T	G	G	G	S	S				T	T													T	B		T	T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		177	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	P	H
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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