Job Description P36999 Confidence 56.32% Date Thu Jan 5 11:54:09 GMT 2012 Rank 463 Aligned Residues 134 % Identity 16% Template c3g7uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: crystal structure of putative dna modification methyltransferase2 encoded within prophage cp-933r (e.coli) Resolution 1.75 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.									.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		A	V	L	D	I	G	C	G	E	G	Y	Y	T	H	A	F	A	D	A	L	P	E	I	T	T	F	G	L	D	V	S	K	V	A	I	K	A	A	A	K	R	Y	P	Q	V	T	F	C	V	A	S	S	H	R	L	P	F	S	D	.	.	.	.	.	.	.	.	T	S	M	D	A	I	I	R	I	Y	A	P	C
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence																							.																																						.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		N	V	I	D	L	F	S	G	V	G	G	L	S	L	G	A	A	R	A	G	F	.	D	V	K	M	A	V	E	I	D	Q	H	A	I	N	T	H	A	I	N	F	P	R	S	L	H	V	Q	E	D	V	S	L	L	N	A	E	I	I	K	G	F	F	K	N	D	M	P	I	D	G	I	I	G	G	P	P	C	Q
Template Known Secondary structure							T		T	T	S										T		.								S													T	T	S							G	G	G												S
Template Predicted Secondary structure																							.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		160	.	.	.													.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Query Sequence		K	A	E	E	.	.	.	.	.	.	.	.	.	.	.	.	L	A	R	V	V	K	P	G	G	W	V	I	T	A	T	P	G	P	.	.	.	.	.	.	R	H	L	M	E	L	K	G	L	I	Y	N	E	V	H	L	H	A	P	H	A	E	Q	L	E	G	F	T	L	Q	Q	S	A	E	L	C	Y	P	M	R
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	S	D	D	S	R	N	Q	L	Y	M	H	F	Y	R	L	V	S	E	L	Q	P	L	F	F	L	A	E	N	V	P	G	I	M	Q	E	K	Y	S	G	I	R	N	K	A	F	N	L	V	S	G	D	Y	D	I	L	D	P	I	K	V	K	A	S	D	Y	G	A	P	T	I	R	T	R	Y	F	F	I	G
Template Known Secondary structure		T	T																						S								T	T	T	T		G	G	G													T	T											G	G	G	G	T		S	B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		222
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		168

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions