|   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | I | V | A | Q | L | R | E | R | L | D | D | K | A | T | A | V | L | D | I | G | C | G | E | G | Y | Y | T | H | A | F | A | D | A | L | . |
P | E | I | T | T | F | G | L | D | V | S | K | V | A | I | K | A | A | A | K | . |
. |
. |
. |
. |
. |
. |
R | Y | P | Q | V | T | F | C | V | A | S | S | H | R | L | P |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
S | D | F | Y | K | X | I | D | E | Y | H | D | G | E | R | K | L | L | V | D | V | G | C | G | P | G | T | A | T | L | Q | X | A | Q | E | L | K | P | F | E | Q | I | I | G | S | D | L | S | A | T | X | I | K | T | A | E | V | I | K | E | G | S | P | D | T | Y | K | N | V | S | F | K | I | S | S | S | D | D | F | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| S |
|
| S |  |  |  |  |  | T |
| T | T | T |  |  |  |  |  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T | T | T | T |  |  |  |  |  |
|
| T | T |
|
| G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
  |   |
144 | . | . | |
|
|
|
|
|
. | . | . | 150 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | S | D | . |
. |
. |
. |
. |
. |
T | S | M | D | A | I | I | R | . |
. |
. |
. |
. |
. |
I | Y | A | P | C | K | A | E | E | L | A | R | V | V | K | P | G | G | W | V | I | T | A | T | P | G |
Query Conservation |   |
  |   |
| . | . | . | . | . | . |   |
|
|
|   |
|   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |
Template Sequence |   |
F | L | G | A | D | S | V | D | K | Q | K | I | D | X | I | T | A | V | E | C | A | H | W | F | D | F | E | K | F | Q | R | S | A | Y | A | N | L | R | K | D | G | T | I | A | I | W | G | Y | A |
Template Known Secondary structure |   |
G | G |
| T | T | T | T | T | S | S |
|  |  |  |  |  |  |  | S |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |