Return to main results Retrieve Phyre Job Id

Job DescriptionP36999
Confidence99.73%DateThu Jan 5 11:54:09 GMT 2012
Rank5Aligned Residues166
% Identity19%Templatec3e7pA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of of putative methyltransferase from bacteroides2 vulgatus atcc 8482
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.... .....90.........100.........110.........120.......
Predicted Secondary structure 






..
















...
Query SS confidence 































. .










































. . .
Query Sequence  EMMQARRAFLDAGHYQPLRDAIVAQLRERLDD. . KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAK. . .
Query Conservation      

   
  
 
  
   
   
      ..    






 
     
            
 
      
  ...
Alig confidence 































..























.

















...
Template Conservation               
  

        
  
  
    







 
     

    .  
 


 
      
     
Template Sequence  DVNLICDFFLNTERQGPGSPEVTLKALSFIDNLTNKSLIADLGCGTGGQTMILAQHVP. GKITGIDFFPGFIERFNKNAE
Template Known Secondary structure  TTSS
SSS

TT




TT
T
TT
S
.SS
Template Predicted Secondary structure 


























.







Template SS confidence 















































































   13......20.........30.........40.........50.........60.........70 .........80.........90.
 
   128.130.........140.........150.........160 .........170........ .180.........190.....
Predicted Secondary structure  ...














......








...






Query SS confidence  . . .
































. . . . . .

















. . .
















Query Sequence  . . . RYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCK. . . . . . AEELARVVKPGGWVITAT. . . PGPRHLMELKGLIYNEV
Query Conservation  ...              

  
 


 
        ......  
  






 

   ...
      


       
Alig confidence  ...
































......

















...
















Template Conservation                          

 
 
   
       

    
 




 
                        
Template Sequence  KLNLQNRVKGIVGSMDDLSFEKDSLDLIWSEGAIYNIGFERGLKEWRNYLKPGGYLAVSESVWFTDQRPAEIHDFWMSAY
Template Known Secondary structure  TT
TTT

TTS



TT
S
GGGT
GGG
SSS

TT
Template Predicted Secondary structure 































Template SS confidence 















































































   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   196...200.........210.........
Predicted Secondary structure 










Query SS confidence 























Query Sequence  HLHAPHAEQLEGFTLQQSAELCYP
Query Conservation              
       
   
Alig confidence 























Template Conservation                  

      
Template Sequence  TEIDTVPNKVAQIQKAGYIPVATF
Template Known Secondary structure  TT
TT
Template Predicted Secondary structure 








Template SS confidence 























   172.......180.........190.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions