Job Description P36999 Confidence 97.89% Date Thu Jan 5 11:54:09 GMT 2012 Rank 278 Aligned Residues 141 % Identity 13% Template c2wa1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:non-structural protein 5; PDBTitle: structure of the methyltransferase domain from modoc virus,2 a flavivirus with no known vector (nkv) Resolution 2.00 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		D	P	G	D	S	A	E	M	M	Q	A	R	R	A	F	L	D	A	G	H	Y	Q	P	L	R	D	A	I	V	A	Q	L	R	E	R	L	D	D	K	A	T	A	V	L	D	I	G	C	G	E	G	Y	Y	T	H	A	F	A	D	A	L	P	E	I	T	T	F	G	L	D	V	.	.	.	S	K	V	A	I	K
Query Conservation																																																																									.	.	.
Alig confidence														.	.	.	.																																																								.	.	.
Template Conservation														.	.	.	.
Template Sequence		N	Q	L	D	A	K	E	F	M	A	Y	R	.	.	.	.	R	R	F	V	V	S	R	G	T	A	K	L	A	W	I	D	E	R	G	G	V	E	L	K	G	T	V	V	D	L	G	C	G	R	G	S	W	S	Y	Y	A	A	S	Q	P	N	V	R	E	V	K	A	Y	T	L	G	T	S	G	H	E	K	P	R
Template Known Secondary structure			T											.	.	.	.		T	T															T	T	S											T		T	T	S								T	S	T	T											S	T	T	S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.														.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query Sequence		A	A	A	K	R	Y	P	Q	V	T	F	C	V	A	S	S	H	R	L	P	F	S	D	T	S	M	D	A	I	I	R	I	Y	A	P	C	K	A	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	R	V	V	K	.	.	P	G	G	W	V	I	T	A	T	P	G	P	R	H	L	M	E	L	K
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation
Template Sequence		L	V	E	T	F	G	W	N	L	I	T	F	K	S	K	V	D	V	T	K	M	E	P	F	Q	A	D	T	V	L	C	D	I	G	E	S	N	P	T	A	A	V	E	A	S	R	T	L	T	V	L	N	V	I	S	R	W	L	E	Y	N	Q	G	C	G	F	C	V	K	V	L	N	P	Y	S	C	D	V	L	E
Template Known Secondary structure						T	T	G	G	G						S			T	T	T							S											S	S																						S	T	T								S				S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		189	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		196	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions