Job Description P36999 Confidence 78.12% Date Thu Jan 5 11:54:09 GMT 2012 Rank 383 Aligned Residues 47 % Identity 26% Template c2hwkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:helicase nsp2; PDBTitle: crystal structure of venezuelan equine encephalitis2 alphavirus nsp2 protease domain Resolution 2.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.															.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	V	T	F	C	V	A	S	S	H	R	L	P	F	S	D	T	S	M	D	A	I	I	R	I	.	.	.	.	Y	A	P	C	K	A	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	V	V	K	P	G	G	W	V	I	T
Query Conservation																												.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	A	T	F	R	A	R	L	D	L	G	I	P	G	D	V	P	K	Y	D	I	I	F	V	N	V	R	T	P	Y	K	Y	H	H	Y	Q	Q	C	E	D	H	A	I	K	L	S	M	L	T	K	K	A	C	L	H	L	N	P	G	G	T	C	V	S
Template Known Secondary structure		T	T		S					G	G	G		S		T	T	S																S																T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		655	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions