 |
Job Description | P36999 | Confidence | 99.04% | Date | Thu Jan 5 11:54:09 GMT 2012 |
Rank | 189 | Aligned Residues | 106 |
% Identity | 25% | Template | c2hnkC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:sam-dependent o-methyltransferase; |
PDBTitle: crystal structure of sam-dependent o-methyltransferase from2 pathogenic bacterium leptospira interrogans
|
Resolution | 2.30 Å |
|
 |
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | R | D | A | I | V | A | Q | L | R | E | R | L | D | D | K | A | T | A | V | L | D | I | G | C | G | E | G | Y | Y | T | H | A | F | A | D | A | L | P | . |
E | I | T | T | F | G | L | D | V | S | K | V | A | I | K | A | A | A | K | R | Y | . |
. |
. |
. |
. |
. |
P | Q | V | T | F | C | V | A | S | S | H | R |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   | . |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |
|   |   |   |   | . | . |   |
|   |   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   |
Template Sequence |   |
P | E | E | G | Q | F | L | N | I | L | T | K | I | S | . |
. |
G | A | K | R | I | I | E | I | G | T | F | T | G | Y | S | S | L | C | F | A | S | A | L | P | E | D | G | K | I | L | C | C | D | V | S | E | E | W | T | N | V | A | R | K | Y | W | K | E | N | G | L | E | N | K | I | F | L | K | L | G | S | A | L | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | T |
|
|  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G |  |  |  |  |  | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | |
|
|
|
. | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | P | F | S | D | T | S | M | D | A | I | I | R | . |
. |
. |
. |
I | Y | A | P | C | K | A | E | E | L | A | R | V | V | K | P | G | G | W | V | I | T |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |
|
|
|   |
|   |   | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |
Template Sequence |   |
T | L | Q | V | L | I | D | S | K | S | A | P | S | W | A | S | D | F | A | F | G | P | S | S | I | D | L | F | F | L | D | A | D | K | E | N | Y | P | N | Y | Y | P | L | I | L | K | L | L | K | P | G | G | L | L | I | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| S | S |
|
| T | T | T | T | T | T |
|
| S | T | T |
|  |  |  |  |  |  |
| S |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|