Job Description P36999 Confidence 93.22% Date Thu Jan 5 11:54:09 GMT 2012 Rank 327 Aligned Residues 61 % Identity 20% Template c1v9pB_ PDB info PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	F	S	C	P	L	C	H	Q	P	L	S	R	E	K	N	S	Y	I	C	P	Q	R	H	Q	F	D	M	A	K	E	G	Y	V	N	L	L	P	V	Q	H	K	R	S	R	D	P	G	D	S	A	E	M	M	Q	A	R	R	A	F	L	D	A	G	H
Query Conservation
Alig confidence																																										.	.														.	.	.
Template Conservation																																										.	.														.	.	.
Template Sequence		W	P	E	T	C	P	E	C	G	H	R	L	V	K	E	G	K	V	H	R	C	P	N	P	L	C	P	A	K	R	F	E	A	I	R	H	Y	A	S	R	.	.	K	A	M	D	I	E	G	L	G	E	K	L	I	.	.	.	E	R	L	L	E	K	G	L
Template Known Secondary structure				S	B		T	T	T			B		B			T	T	S		B				T	T		G	G	G										S	T	.	.	T	T	T			T	T							.	.	.							T	S
Template Predicted Secondary structure																																										.	.														.	.	.
Template SS confidence
		2405	.	.	.	.	2410	.	.	.	.	.	.	.	.	.	2420	.	.	.	.	.	.	.	.	.	2430	.	.	.	.	.	.	.	.	.	2440	.	.	.	.			.	.	.	.	.	2450	.	.	.	.	.	.	.				.	.	2460	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions