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Job DescriptionP36999
Confidence98.99%DateThu Jan 5 11:54:09 GMT 2012
Rank201Aligned Residues161
% Identity19%Templatec1tw3A_
PDB info PDB header:transferaseChain: A: PDB Molecule:carminomycin 4-o-methyltransferase; PDBTitle: crystal structure of carminomycin-4-o-methyltransferase2 (dnrk) in complex with s-adenosyl-l-homocystein (sah) and3 4-methoxy-e-rhodomycin t (m-et)
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120........ .130.........140.........150
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Query Sequence  AQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKR. . . . . YPQVTFCVASSHRLPFSDTSMD
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Template Sequence  APAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAI
Template Known Secondary structure  S

TT
ST
TTS
TT

TTTT
TTT

TTS

SS
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   169170.........180.........190.........200.........210.........220.........230.........240........
 
   151.... ....160.........170.........180.........190.........200.........210.........220...
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Query Sequence  AIIRI. . . . . . . YAPCKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYPMRLR
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Template Sequence  ILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTEL. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
GGGS
T

B
GGG

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   249250.........260.........270.........280.........290.........
 
   224.....230.........240.........250........ .260........
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Query Sequence  GDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQT. . . . . . . . . . DFNIHLWQRS
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Template Sequence  . . . DLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAPA
Template Known Secondary structure  ...S



BTT
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   300.........310.........320.........330.........340.........350.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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