Job Description P77549 Confidence 1.73% Date Thu Jan 5 12:30:27 GMT 2012 Rank 52 Aligned Residues 184 % Identity 8% Template d1u7ga_ SCOP info Ammonium transporter Ammonium transporter Ammonium transporter Resolution 1.40

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	S	L	W	S	V	V	G	L	I	W	K	P	G	L	G	L	A	L	Q	G	V	G	F	A	V	I	G	T	F	V	S	L	Y	F	A	S	K	G	W	A	M	A	G	F	T	L	T	A	F	G	G	A	F	V	V	M	R	V	M	F	G	W	M	P	D	R	F	G	G	V	K	V	A	I	V	S	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	R	V	G	F	G	K	E	A	F	K	P	H	N	L	P	X	V	F	T	G	T	A	I	L	Y	I	G	W	F	G	F	N	A	G	S	A	G	T	A	N	E	I	A	A	L	A	F	V	N	T	V	V	A	T	A	A	A	I	L	G	W	I	F	G	E	W	A	L	R	G	L	P	S	L	L	G	A	C
Template Known Secondary structure							T	T		S	S			G	G	G																					G	G	G	S	S	S	S																														S	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		V	E	T	V	G	L	L	L	L	W	Q	A	P	G	A	W	V	A	L	A	G	A	A	L	T	G	A	G	C	S	L	I	F	P	A	L	G	V	E	V	V	K	R	V	P	S	Q	V	R	G	T	A	L	G	G	Y	A	A	F	Q	D	I	A	L	G	V	S	G	P	L	A	G	M	L	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																																																												.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	A	I	A	G	L	V	G	V	T	P	A	C	G	Y	I	G	V	G	G	A	L	I	I	G	V	V	A	G	L	A	G	L	W	G	V	T	X	L	K	R	L	L	R	V	D	D	P	C	D	V	F	G	V	H	G	V	C	G	I	V	G	C	I	X	T	G	I	F	A	A	S	S	L	G	G	V	G	F
Template Known Secondary structure												T	T	T	T	T	T	S																													S			G	G	G																				T	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
								362	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure		.	.	.	.	.	.										.
Query SS confidence		.	.	.	.	.	.										.
Query Sequence		.	.	.	.	.	.	A	T	T	F	G	Y	S	S	V	.	F	L	A	G	A	I	S	A	V	L	G	I	I	V	T	I	L	S	F	R	R
Query Conservation		.	.	.	.	.	.										.
Alig confidence		.	.	.	.	.	.										.
Template Conservation
Template Sequence		A	E	G	V	T	X	G	H	Q	L	L	V	Q	L	E	S	I	A	I	T	I	V	W	S	G	V	V	A	F	I	G	Y	K	L	A	D	L
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions