Job Description P77549 Confidence 99.98% Date Thu Jan 5 12:30:27 GMT 2012 Rank 2 Aligned Residues 386 % Identity 14% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	A	V	S	Q	T	E	T	R	S	S	A	N	F	S	L	F	R	I	A	F	A	V	F	L	T	Y	M	T	V	G	L	P	L	P	V	I	P	L	F	V	H	H	E	L	G	Y	G	N	T	M	V	G	I	A	V	G	I	Q	F	L	A	T	V	L	T	R	G	Y	A	G	R	L	A	D	Q	Y	G	A
Query Conservation
Alig confidence																																												.
Template Conservation																																												.
Template Sequence		L	P	A	A	E	I	D	P	T	Y	R	R	L	R	W	Q	I	F	L	G	I	F	F	G	Y	A	A	Y	Y	L	V	R	K	N	F	A	L	A	M	P	Y	L	.	V	E	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S	V	S	D	R	S	N	P
Template Known Secondary structure					S																													T	S								T	.	T	S	S	T	T		S	S																											S
Template Predicted Secondary structure																																												.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	S	A	L	Q	G	M	L	A	C	G	L	A	G	G	A	L	L	L	A	A	I	L	P	V	S	A	P	F	K	F	A	L	L	V	V	G	R	L	I	L	G	F	G	E	S	Q	L	L	T	G	A	L	T	W	G	L	G	I	V	G	P	K	H	S	G	K	V	M	S	W	N	G	M	A	I	Y	G	A
Query Conservation
Alig confidence																										.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		R	V	F	L	P	A	G	L	I	L	A	A	A	V	M	L	F	M	G	F	V	P	W	A	.	.	.	.	T	S	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V	W	N	C	A	H	N	V	G
Template Known Secondary structure																										.	.	.	.		S	S	S	S																T										T	T		T	T	T
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	V	G	A	P	L	G	L	L	I	H	S	H	Y	G	F	A	A	L	A	I	T	T	M	V	L	P	V	L	A	W	A	C	N	G	T	V	R	K	V	P	A	L	A	G	E	R	P	S	L	W	S	V	V	G	L	I	W	K	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	I	P	P	L	L	F	L	L	G	M	A	W	F	N	D	W	H	A	A	L	Y	M	P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y	K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K	L	L	W	Y	I	A	I	A
Template Known Secondary structure			T	S												T			S	T	T		T																					S	S	T	T	T				S		T	T	T						T							T	S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
			223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure		.																																																											.	.	.	.	.
Query SS confidence		.																																																											.	.	.	.	.
Query Sequence		.	L	G	L	A	L	Q	G	V	G	F	A	V	I	G	T	F	V	S	L	Y	F	A	S	K	G	W	A	M	A	G	F	T	L	T	A	F	G	G	A	F	V	V	M	R	V	M	F	G	W	M	P	D	R	F	G	G	V	K	.	.	.	.	.	V	A	I	V	S	L	L	V	E	T	V	G	L	L	L	L
Query Conservation		.																																																											.	.	.	.	.
Alig confidence		.																																																											.	.	.	.	.
Template Conservation
Template Sequence		N	V	F	V	Y	L	L	R	Y	G	I	L	D	W	S	P	T	Y	L	K	E	V	K	H	F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T	I	A	T	I	V	Y	W	M
Template Known Secondary structure																				B	T	T	B	S																																T	S	T	T																				T	T	S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		W	Q	A	P	G	A	W	V	A	L	A	G	A	A	L	T	G	A	G	C	S	L	I	F	P	A	L	G	V	E	V	V	K	R	V	P	S	Q	V	R	G	T	A	L	G	G	Y	A	A	F	Q	D	I	.	A	L	G	V	S	G	P	L	A	G	M	L	A	T	T	F	G	Y	S	S	V	F	L	A	G	A
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		N	P	A	G	N	P	T	V	D	M	I	C	M	I	V	I	G	F	L	I	Y	G	P	V	M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	T	A	A	G	F	T	G	L	F	G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T	V	D	F	F	G	W	D	G	G	F	M	V	M	I
Template Known Secondary structure				T	T																	T													T	S		T	T																															S	S		S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	V	L	G	I	I	V	T	I	L	S	F	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	S	I	L	A	V	I	L	L	I	V	V	M	I	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions