Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE88
Confidence54.97%DateThu Jan 5 11:22:47 GMT 2012
Rank264Aligned Residues84
% Identity20%Templated1geqa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.. ....... 60.........70.........80 ......
Predicted Secondary structure 




..






....................
















......

Query SS confidence 

















. .






. . . . . . . . . . . . . . . . . . . .




















. . . . . .





Query Sequence  EQALDLLDDSIDLLLLDV. . MMPKKNG. . . . . . . . . . . . . . . . . . . . IDTLKALRQTHQTPVIMLTAR. . . . . . GSELDR
Query Conservation   


  
   




 
 ..  
   
....................              

 

  ......      
Alig confidence 

















..






....................




















......





Template Conservation        
  


 









  


 
  
   

  
         
  

     



  
 
     
   
 
Template Sequence  LNFLLALDEYAGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFL
Template Known Secondary structure  GGGBS



S

TTS
TT

TT





Template Predicted Secondary structure 





























Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   87..90.........100.........110........
Predicted Secondary structure 










Query SS confidence 































Query Sequence  VLGLELGADDYLPKPFNDRELVARIRAILRRS
Query Conservation        

   
 

     
   
   
   
Alig confidence 































Template Conservation    
   

 



 

  
            
Template Sequence  AEAKASGVDGILVVDLPVFHAKEFTEIAREEG
Template Known Secondary structure  T

TT

GGGT
Template Predicted Secondary structure 









Template SS confidence 































   102.......110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions