Job Description P0AE88 Confidence 29.03% Date Thu Jan 5 11:22:47 GMT 2012 Rank 338 Aligned Residues 60 % Identity 17% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		33	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		D	G	E	Q	A	L	D	L	L	D	D	.	S	I	D	L	L	L	L	D	V	M	M	P	K	K	N	G	I	D	T	L	K	A	L	R	Q	T	H	Q	T	P	V	I	M	L	T	A	R	G	S	E	L	D	R	V	L	G	L	E	L	G	A	D	D
Query Conservation													.
Alig confidence													.								.	.	.							.
Template Conservation																					.	.	.							.
Template Sequence		A	Y	N	K	G	V	A	L	I	Q	K	V	Q	P	D	C	I	E	L	.	.	.	L	P	G	I	I	P	.	E	Q	V	Q	K	M	T	Q	K	L	H	I	P	V	I	A	G	G	L	I	E	T	S	E	Q	V	N	Q	V	I	A	S	G	A	I	A
Template Known Secondary structure																S					.	.	.			T	T			.																		S	S			S									T	T	T
Template Predicted Secondary structure																					.	.	.							.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions