Job Description P0AE88 Confidence 91.80% Date Thu Jan 5 11:22:47 GMT 2012 Rank 162 Aligned Residues 52 % Identity 27% Template c3k69A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution Resolution 1.95 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		L	L	Y	L	L	A	Q	H	L	G	Q	V	V	S	R	E	H	L	S	Q	E	V	L	G	K	R	L	T	P	F	D	R	A	I	D	M	H	I	S	N	L	R	R	K	L	P	D	R	K	D	G	H	P	W	F	K	T	L	R	G	R	.	.	G	Y	L	M
Query Conservation																																																															.	.
Alig confidence																								.	.	.	.	.																		.	.	.	.	.	.	.	.										.	.
Template Conservation																								.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Sequence		S	I	L	Y	L	D	A	H	R	D	S	K	V	A	S	R	E	L	A	Q	S	L	.	.	.	.	.	H	L	N	P	V	X	I	R	N	I	L	S	V	L	H	K	H	.	.	.	.	.	.	.	.	G	Y	L	T	G	T	V	G	K	N	G	G	Y	Q	L
Template Known Secondary structure								T	T	T	T	S		B										.	.	.	.	.	T	S		G	G	G	T										T	.	.	.	.	.	.	.	.	T	S	S					S	T	T
Template Predicted Secondary structure																								.	.	.	.	.																		.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions