Job Description P0AE88 Confidence 27.64% Date Thu Jan 5 11:22:47 GMT 2012 Rank 348 Aligned Residues 106 % Identity 18% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.											.
Query SS confidence																																	.											.
Query Sequence		N	K	I	L	L	V	D	D	D	R	E	L	T	S	L	L	K	E	L	L	E	M	E	G	F	N	V	I	V	A	H	.	D	G	E	Q	A	L	D	L	L	D	.	D	S	I	D	L	L	L	L	D	V	M	M	P	K	K	N	G	I	D	T	L	K	A	L	R	Q	T	H	Q	T	P	V	I	M	L	T	A
Query Conservation																																	.											.
Alig confidence																				.	.	.	.										.											.																																					.
Template Conservation																				.	.	.	.																																																										.
Template Sequence		I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	.	.	.	.	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	.
Template Known Secondary structure									S											.	.	.	.	T	T						S		T	T	S							T	T	G	G	G		S							S																	S	S	S							.
Template Predicted Secondary structure																				.	.	.	.																																																										.
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.					.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	S	E	L	D	R	V	L	G	L	E	L	G	A	D	D	Y	L	P	K	P	F	N	D	R	E	L	V	A	R	I	R	A	I	L	R
Query Conservation
Alig confidence		.																			.	.	.
Template Conservation		.																			.	.	.
Template Sequence		.	H	Y	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	V	.	.	.	X	G	E	R	E	I	A	R	T	X	L	E	L	L	E
Template Known Secondary structure		.	S	S										T	T		S				.	.	.
Template Predicted Secondary structure		.																			.	.	.
Template SS confidence
			516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.				.	.	.	.	.	.	540	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions