Job Description P0AE88 Confidence 99.84% Date Thu Jan 5 11:22:47 GMT 2012 Rank 69 Aligned Residues 124 % Identity 19% Template c3f6cB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli Resolution 1.45 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																											.																	.
Query SS confidence																											.																	.
Query Sequence		K	I	L	L	V	D	D	D	R	E	L	T	S	L	L	K	E	L	L	E	M	E	G	F	N	.	V	I	V	A	H	D	G	E	Q	A	L	D	L	L	D	D	.	S	I	D	L	L	L	L	D	V	M	M	P	K	K	N	G	I	D	T	L	K	A	L	R	Q	T	H	Q	T	P	V	I	M	L	T	A	R
Query Conservation																											.																	.
Alig confidence																											.																	.
Template Conservation
Template Sequence		N	A	I	I	I	D	D	H	P	L	A	I	A	A	I	R	N	L	L	I	K	N	D	I	E	I	L	A	E	L	T	E	G	G	S	A	V	Q	R	V	E	T	L	K	P	D	I	V	I	I	D	V	D	I	P	G	V	N	G	I	Q	V	L	E	T	L	R	K	R	Q	Y	S	G	I	I	I	I	V	S	A
Template Known Secondary structure																							T	T								S	S	S	T	T											S						T	T		S	S	S												T	T			S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	E	L	D	R	V	L	G	L	E	L	G	A	D	D	Y	L	P	K	P	F	N	D	R	E	L	V	A	R	I	R	A	I	L	R	R	S	H	W	S	E	Q	Q	Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	H	F	Y	G	K	H	C	A	D	A	G	A	N	G	F	V	S	K	K	E	G	M	N	N	I	I	A	A	I	E	A	A	K	N	G	Y	C	Y	F	P	F	S	L	N
Template Known Secondary structure					S	T							T	T		S					G	G	G		T												T	T			B
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions