Job Description P0AE88 Confidence 97.95% Date Thu Jan 5 11:22:47 GMT 2012 Rank 133 Aligned Residues 187 % Identity 18% Template c2vycA_ PDB info PDB header:lyase Chain: A: PDB Molecule:biodegradative arginine decarboxylase; PDBTitle: crystal structure of acid induced arginine decarboxylase2 from e. coli Resolution 2.4 Å

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		3	.	.	.	.	.	.	10	.	.	.	.									.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																																	.	.													.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.																																	.	.													.	.	.	.	.
Query Sequence		K	I	L	L	V	D	D	D	R	E	L	T	.	.	.	.	.	.	.	.	S	L	L	K	E	L	L	E	M	E	G	F	N	V	I	V	A	H	D	G	E	Q	A	L	D	L	L	D	D	S	I	D	.	.	L	L	L	L	D	V	M	M	P	K	K	N	.	.	.	.	.	G	I	D	T	L	K	A	L	R
Query Conservation														.	.	.	.	.	.	.	.																																	.	.													.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																																	.	.													.	.	.	.	.
Template Conservation
Template Sequence		K	V	L	I	V	E	S	E	F	L	H	Q	D	T	W	V	G	N	A	V	E	R	L	A	D	A	L	S	Q	Q	N	V	T	V	I	K	S	T	S	F	D	D	G	F	A	I	L	S	S	N	E	A	I	D	C	L	M	F	S	Y	Q	M	E	H	P	D	E	H	Q	N	V	R	Q	L	I	G	K	L	H	E
Template Known Secondary structure									T	T	S	T	T	S																	T	T							S	S									T	T	T				S										S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																		.																									.
Query SS confidence																		.																									.
Query Sequence		Q	T	H	Q	T	P	V	I	M	L	T	A	R	G	S	E	.	L	D	R	V	L	G	L	E	L	G	A	D	D	Y	L	P	K	P	F	N	D	R	E	L	.	V	A	R	I	R	A	I	L	R	R	S	H	W	S	E	Q	Q	Q	N	N	D	N	G	S	P	T	L	E	V	D	A	L	V	L	N	P	G	R
Query Conservation																		.																									.
Alig confidence																		.																									.
Template Conservation
Template Sequence		R	Q	Q	N	V	P	V	F	L	L	G	D	R	E	K	A	L	A	A	M	D	R	D	L	L	E	L	V	D	E	F	A	W	I	L	E	D	T	A	D	F	I	A	G	R	A	V	A	A	M	T	R	Y	R	Q	Q	L	L	P	P	L	F	S	A	L	M	K	Y	S	D	I	H	E	Y	S	W	A	A	P	G
Template Known Secondary structure			S	T	T															T		S								S					T	T	T	S																			T	S	S												T	T				S	S	S	S	S	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		146	.	.	.	150	.																.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		Q	E	A	S	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	T	L	E	L	T	G	T	.	E	F	T	L	L	Y	L	L	A	Q	H	L	G	Q	V	V	S	R	E	H	L	S	Q	E	V	L	G	K	R
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		H	Q	G	G	V	G	F	T	K	T	P	A	G	R	F	Y	H	D	Y	Y	G	E	N	L	F	R	T	D	M	G	I	E	R	T	S	L	G	S	L	L	D	H	T	G	A	F	G	E	S	E	K	Y	A	A	R	V	F	G	A	D
Template Known Secondary structure		T	T	T	T	T	G	G	G	G	S																	T						T	T	T	T			T	T	T	T																T		S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions