Job Description P0AE88 Confidence 99.76% Date Thu Jan 5 11:22:47 GMT 2012 Rank 116 Aligned Residues 117 % Identity 28% Template c2qsjB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-binding response regulator, luxr family; PDBTitle: crystal structure of a luxr family dna-binding response2 regulator from silicibacter pomeroyi Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																										.	.																				.	.
Query SS confidence																										.	.																				.	.
Query Sequence		M	N	K	I	L	L	V	D	D	D	R	E	L	T	S	L	L	K	E	L	L	E	M	E	.	.	G	F	N	V	I	V	A	H	D	G	E	Q	A	L	D	L	L	D	D	.	.	S	I	D	L	L	L	L	D	V	M	M	P	K	K	N	G	I	D	T	L	K	A	L	R	Q	T	H	Q	T	P	V	I	M
Query Conservation																										.	.																				.	.
Alig confidence																										.	.																				.	.																	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.
Template Sequence		L	T	V	V	L	I	V	D	D	H	H	L	I	R	A	G	A	K	N	L	L	E	G	A	F	S	G	M	R	V	E	G	A	E	T	V	S	D	A	L	A	F	L	E	A	D	N	T	V	D	L	I	L	L	D	V	A	I	D	G	L	V	R	.	.	.	.	.	L	K	R	F	D	P	S	N	A	V	A	L
Template Known Secondary structure										S																	T	T							S	S										T	T				S														.	.	.	.	.						T	T	S
Template Predicted Secondary structure																																																																	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	R	G	S	E	L	D	R	V	L	G	L	E	L	G	A	D	D	Y	L	P	K	P	F	N	D	R	E	L	V	A	R	I	R	A	I	L	R	R	S	H	W	S	E	Q	Q
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		I	S	G	E	.	.	H	E	L	I	R	A	A	L	E	A	G	A	D	G	F	I	P	K	S	A	D	P	Q	V	L	I	H	A	V	S	L	I	L	E	G	E	I	F	L	P	R	S
Template Known Secondary structure						.	.										T	T		S	B				T	T	S														T	T			B			S
Template Predicted Secondary structure						.	.
Template SS confidence
		82	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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