Job Description P0AE88 Confidence 100.00% Date Thu Jan 5 11:22:47 GMT 2012 Rank 1 Aligned Residues 223 % Identity 39% Template c2oqrA_ PDB info PDB header:transcription,signaling protein Chain: A: PDB Molecule:sensory transduction protein regx3; PDBTitle: the structure of the response regulator regx3 from mycobacterium2 tuberculosis Resolution 2.03 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		N	K	I	L	L	V	D	D	D	R	E	L	T	S	L	L	K	E	L	L	E	M	E	G	F	N	V	I	V	A	H	D	G	E	Q	A	L	D	L	L	D	D	.	S	I	D	L	L	L	L	D	V	M	M	P	K	K	N	G	I	D	T	L	K	A	L	R	Q	T	H	Q	T	P	V	I	M	L	T	A	R
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		T	S	V	L	I	V	E	D	E	E	S	L	A	D	P	L	A	F	L	L	R	K	E	G	F	E	A	T	V	V	T	D	G	P	A	A	L	A	E	F	D	R	A	G	A	D	I	V	L	L	D	L	M	L	P	G	M	S	G	T	D	V	C	K	Q	L	R	A	R	S	S	V	P	V	I	M	V	T	A	R
Template Known Secondary structure									S															T	T								S														S						S	S		S	S	S														S		S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	E	L	D	R	V	L	G	L	E	L	G	A	D	D	Y	L	P	K	P	F	N	D	R	E	L	V	A	R	I	R	A	I	L	R	R	S	H	W	S	E	Q	Q	Q	N	N	D	N	G	S	P	T	L	E	V	D	A	L	V	L	N	P	G	R	Q	E	A	S	F	D	G	Q	T	L	E	L	T	G	T
Query Conservation
Alig confidence																																																						.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		D	S	E	I	D	K	V	V	G	L	E	L	G	A	D	D	Y	V	T	K	P	Y	S	A	R	E	L	I	A	R	I	R	A	V	L	R	R	G	G	D	D	D	S	E	M	S	D	G	V	L	E	S	.	.	.	.	G	P	V	R	M	D	V	E	R	H	V	V	S	V	N	G	D	T	I	T	L	P	L	K
Template Known Secondary structure																S					S	S															T	T	T	T		T	T	S	T	T			S					.	.	.	.	T	T					T	T	T	T					S	S	B
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	T	L	L	Y	L	L	A	Q	H	L	G	Q	V	V	S	R	E	H	L	S	Q	E	V	L	G	K	R	L	T	P	F	D	R	A	I	D	M	H	I	S	N	L	R	R	K	L	P	D	R	K	D	G	H	P	W	F	K	T	L	R	G	R	G	Y	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	D	L	L	E	Y	L	M	R	N	S	G	R	V	L	T	R	G	Q	L	I	D	R	V	W	G	A	D	Y	V	G	D	T	K	T	L	D	V	H	V	K	R	L	R	S	K	I	E	A	D	P	A	N	P	V	H	L	V	T	V	R	G	L	G	Y	K	L
Template Known Secondary structure												T	T	T	S												T	S	S			T	T																		S	S	S	S	S		S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions