Job Description P0AE88 Confidence 77.71% Date Thu Jan 5 11:22:47 GMT 2012 Rank 189 Aligned Residues 47 % Identity 17% Template c2o8xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:probable rna polymerase sigma-c factor; PDBTitle: crystal structure of the "-35 element" promoter recognition domain of2 mycobacterium tuberculosis sigc Resolution 3.00 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	G	T	E	F	T	L	L	Y	L	L	A	Q	H	L	G	Q	V	V	S	R	E	H	L	S	Q	E	V	L	G	K	R	L	T	P	F	D	R	A	I	D	M	H	I	S	N	L	R	R	K	L	P	D
Query Conservation
Alig confidence																				.	.	.										.	.	.	.	.
Template Conservation																				.	.	.										.	.	.	.	.
Template Sequence		D	L	T	T	D	Q	R	E	A	L	L	L	T	Q	L	L	G	L	.	.	.	S	Y	A	D	A	A	A	V	C	.	.	.	.	.	G	C	P	V	G	T	I	R	S	R	V	A	R	A	R	D	A	L	L	A
Template Known Secondary structure		S	S													T	S			.	.	.										.	.	.	.	.	T	S
Template Predicted Secondary structure																				.	.	.										.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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