Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE88
Confidence92.57%DateThu Jan 5 11:22:47 GMT 2012
Rank159Aligned Residues109
% Identity15%Templatec1bmtB_
PDB info PDB header:methyltransferaseChain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3.... ..10.........20.........30.. .......40... ......50......... 60.........70..
Predicted Secondary structure  ....






...

.










..












Query SS confidence 




. . . .
























. . .










.















. .












Query Sequence  KILLV. . . . DDDRELTSLLKELLEMEGFNVIVAH. . . DGEQALDLLDD. SIDLLLLDVMMPKKNG. . IDTLKALRQTHQT
Query Conservation 




....


      
   
   
  
  
 ...   


  
  . 




 
   
   
..             
Alig confidence 




....
























...










.















..












Template Conservation   


 

 

 



  

   
   
  
  

  

 
  
        
 



 
           
  
   
  
Template Sequence  KMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFT
Template Known Secondary structure 
TT



TTS


SS

T
S

STT

Template Predicted Secondary structure 


























Template SS confidence 















































































   748.750.........760.........770.........780.........790.........800.........810.........820.......
 
   73...... 80.........90.........100.........110.
Predicted Secondary structure 


....













Query SS confidence 






. . . .































Query Sequence  PVIMLTA. . . . RGSELDRVLGLELGADDYLPKPFNDRELVARI
Query Conservation   

 

 ....             

   
 

     
   
Alig confidence 






....































Template Conservation    
 



                


    

  

     
Template Sequence  IPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNASRTVGVVAAL
Template Known Secondary structure  S
STT

TTGGG
SS


S
Template Predicted Secondary structure 












Template SS confidence 










































   828.830.........840.........850.........860.........870
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions