Job Description P12999 Confidence 99.86% Date Thu Jan 5 11:33:17 GMT 2012 Rank 32 Aligned Residues 215 % Identity 19% Template d1p91a_ SCOP info S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases rRNA methyltransferase RlmA Resolution 2.80

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		N	K	Q	A	I	A	A	A	F	G	R	A	A	A	H	Y	E	Q	H	A	D	L	Q	R	Q	S	A	D	A	L	L	A	M	L	P	Q	R	K	Y	T	H	V	L	D	A	G	C	G	P	G	W	M	S	R	H	W	R	E	R	H	A	.	.	Q	V	T	A	L	D	L	S	P	P	M	L	V	Q	A	R	Q
Query Conservation																																																															.	.
Alig confidence																		.	.																				.																								.	.
Template Conservation																		.	.																				.
Template Sequence		S	A	E	X	X	Q	A	R	R	A	F	L	D	A	G	H	.	.	Y	Q	P	L	R	D	A	I	V	A	Q	L	R	E	R	L	D	D	K	.	A	T	A	V	L	D	I	G	C	G	E	G	Y	Y	T	H	A	F	A	D	A	L	P	E	I	T	T	F	G	L	D	V	S	K	V	A	I	K	A	A	A	K
Template Known Secondary structure		S												T	T	T	T	.	.	T															S		T	T	.								T		T	T	S	T	T							T		T	T	S							S
Template Predicted Secondary structure																		.	.																				.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	A	A	D	H	Y	L	A	G	D	I	E	S	L	P	L	A	T	A	T	F	D	L	A	W	S	N	L	A	V	Q	W	C	G	N	L	S	T	A	L	R	E	L	Y	R	V	V	R	P	K	G	V	V	A	F	T	T	L	V	Q	G	S	L	P	E	L	H	Q	A	W	Q	A	V	D	E	R	P	H	A
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		R	Y	P	Q	V	T	F	C	V	A	S	S	H	R	L	P	F	S	D	T	S	X	D	A	I	I	R	I	Y	A	P	C	K	A	E	E	.	.	.	.	.	.	.	L	A	R	V	V	K	P	G	G	W	V	I	T	A	T	P	G	P	R	H	L	X	E	L	K	G	L	I	Y	N	E	V	H	L	H	A	P
Template Known Secondary structure				T	T	S							T	T	S		S	B		T	T									S								.	.	.	.	.	.	.																		T	T	T	T					T	T	T		S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.								.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		N	R	F	L	P	P	D	E	I	E	Q	S	L	N	G	V	H	Y	Q	.	H	H	I	Q	P	I	T	L	W	F	D	D	A	L	S	A	M	R	S	L	K	G	I	G	A	T	H	L	H	E	G	R	D	P	R	I	L	T	R	S	Q	L	Q	R	L	Q	L	A	W	P	Q	Q	Q	G	R	Y	P	L	T	Y
Query Conservation																					.
Alig confidence							.	.	.	.	.	.	.	.	.	.					.																										.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		H	A	E	Q	L	.	.	.	.	.	.	.	.	.	.	E	G	F	T	L	Q	Q	S	A	E	L	C	Y	P	X	R	L	R	G	D	E	A	V	A	L	L	Q	X	T	P	.	.	.	.	.	.	.	F	A	W	R	A	K	P	E	V	W	Q	T	L	A	A	.	.	.	.	.	K	E	V	F	D	C	Q	T
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	T	T																										T	S	T	.	.	.	.	.	.	.	T	G	G	G												.	.	.	.	.		S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		201	.	.	.	.											.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.								.	.	.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	F	L	G	V	I	A	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	N	I	H	L	W	Q	R	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions