Job Description P12999 Confidence 99.75% Date Thu Jan 5 11:33:17 GMT 2012 Rank 63 Aligned Residues 161 % Identity 17% Template c3ocjA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis Resolution 1.39 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.																							.	.	.	.	.
Query SS confidence																																											.	.	.																							.	.	.	.	.
Query Sequence		D	L	Q	R	Q	S	A	D	A	L	L	A	M	L	P	Q	R	K	Y	T	H	V	L	D	A	G	C	G	P	G	W	M	S	R	H	W	R	E	R	H	A	.	.	.	Q	V	T	A	L	D	L	S	P	P	M	L	V	Q	A	R	Q	K	D	A	A	D	.	.	.	.	.	H	Y	L	A	G	D	I	E	S
Query Conservation																																											.	.	.																							.	.	.	.	.
Alig confidence																.																											.	.	.																							.	.	.	.	.
Template Conservation																.
Template Sequence		R	E	R	H	G	H	F	R	R	A	L	Q	R	H	.	L	R	P	G	C	V	V	A	S	V	P	C	G	W	X	S	E	L	L	A	L	D	Y	S	A	C	P	G	V	Q	L	V	G	I	D	Y	D	P	E	A	L	D	G	A	T	R	L	A	A	G	H	A	L	A	G	Q	I	T	L	H	R	Q	D	A	W
Template Known Secondary structure																.			T	T						T	T		T	T						T	S			T	T		T	T								S													T	T	S	T	T	G	G	G								G	G
Template Predicted Secondary structure																.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	L	A	T	A	T	F	D	L	A	W	S	N	L	A	V	Q	W	C	G	N	L	S	T	.	.	.	A	L	R	E	L	Y	R	V	V	R	P	K	G	V	V	A	F	T	T	L	V	Q	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	E	L	H	Q	A	W	Q	A	V	D
Query Conservation																											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	D	T	R	E	G	Y	D	L	L	T	S	N	G	L	N	I	Y	E	P	D	D	A	R	V	T	E	L	Y	R	R	F	W	Q	A	L	K	P	G	G	A	L	V	T	S	F	L	T	P	P	P	A	L	S	P	D	S	P	W	D	X	Q	A	I	D	P	H	D	L	Q	L	Q	Q	L	V	F	T	R	L
Template Known Secondary structure		G					S									S	S	G	G	G																																	T	T	T		T	T					G	G	G	S															T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	P	H	A	N	R	F	L	P	P	D	E	I	E	Q	S	L	N	G	V	H	Y	Q	H	H	I	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	P	R	W	N	A	L	R	T	H	A	Q	T	R	A	Q	L	E	E	A	G	F	T	D	L	R	F	E
Template Known Secondary structure		T			S																	T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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