Job Description P12999 Confidence 97.81% Date Thu Jan 5 11:33:17 GMT 2012 Rank 292 Aligned Residues 121 % Identity 11% Template c3lkzB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:non-structural protein 5; PDBTitle: structural and functional analyses of a conserved hydrophobic pocket2 of flavivirus methyltransferase Resolution 2.00 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																	.	.																							.	.	.
Query SS confidence																																	.	.																							.	.	.
Query Sequence		A	D	A	L	L	A	M	L	P	Q	R	K	Y	T	H	V	L	D	A	G	C	G	P	G	W	M	S	R	H	W	R	.	.	E	R	H	A	Q	V	T	A	L	D	L	S	P	P	M	L	V	Q	A	R	Q	K	.	.	.	D	A	A	D	H	Y	L	A	G	D	I	E	S	L	P	L	A	T	A	T	F	D
Query Conservation																																	.	.																							.	.	.
Alig confidence																																	.	.																							.	.	.
Template Conservation
Template Sequence		L	R	W	L	V	E	R	R	F	L	E	P	V	G	K	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	M	A	T	Q	K	R	V	Q	E	V	R	G	Y	T	K	G	G	P	G	H	E	E	P	Q	L	V	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	R	P	S	E	C	C	D
Template Known Secondary structure								T	T	S											T		T	T								T	T		T	T											S	T	T	S								B	T	T	G	G	G						S			T	T	S	S						S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.														.
Query SS confidence																	.	.	.	.	.	.	.														.
Query Sequence		L	A	W	S	N	L	A	V	Q	W	C	G	N	L	S	.	.	.	.	.	.	.	T	A	L	R	E	L	Y	R	V	V	R	P	K	.	G	V	V	A	F	T	T	L	V	Q	G	S	L	P	E	L	H	Q	A
Query Conservation																	.	.	.	.	.	.	.														.
Alig confidence											.						.	.	.	.	.	.	.														.
Template Conservation											.
Template Sequence		T	L	L	C	D	I	G	E	S	.	S	S	S	A	E	V	E	E	H	R	T	I	R	V	L	E	M	V	E	D	W	L	H	R	G	P	R	E	F	C	V	K	V	L	C	P	Y	M	P	K	V	I	E	K	M
Template Known Secondary structure											.		S																					T	T										S		T	T	S
Template Predicted Secondary structure											.
Template SS confidence
		142	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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