Job Description P12999 Confidence 97.91% Date Thu Jan 5 11:33:17 GMT 2012 Rank 291 Aligned Residues 115 % Identity 19% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

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		28	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.											.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																													.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.																													.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	S	A	D	A	L	L	A	M	L	.	.	.	.	P	Q	R	K	Y	T	H	V	L	D	A	G	C	G	P	G	W	M	S	R	H	W	R	E	R	H	A	Q	.	.	.	.	.	V	T	A	L	D	L	S	P	P	M	L	V	Q	A	R	.	.	.	.	.	.	.	.	.	.	Q	K	D	A	A	D	H
Query Conservation													.	.	.	.																													.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.																													.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	P	V	A	K	L	X	T	Q	I	A	F	L	G	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S	T	Y	N	L	A	R	X	N	X	I	L	H	G	V	P	I	E	N	Q	F	L	H	N
Template Known Secondary structure														T	T		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S															T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.																						120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																								.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence																								.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		Y	L	A	G	D	I	E	S	L	P	L	A	T	A	T	F	D	L	A	W	S	N	.	.	L	A	V	Q	W	C	G	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	A	L	R	E	L	Y	R	V	V	R	P	.	K	G	V	V	A	F	T	T	L	V
Query Conservation																								.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence																								.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		A	D	T	L	D	E	D	W	P	T	Q	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D	D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	A	D	F	A	F	L	L	H	G	Y	Y	H	L	K	Q	D	N	G	V	X	A	I	V	L	P	H
Template Known Secondary structure		S		T	T	T	S		S			S	S				B	S								B	T							G	G	G	G	G	S	T	T	T	G	G	G	S	S				T	T													T	B		T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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