Job Description P12999 Confidence 99.89% Date Thu Jan 5 11:33:17 GMT 2012 Rank 16 Aligned Residues 239 % Identity 13% Template c3g5tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:trans-aconitate 3-methyltransferase; PDBTitle: crystal structure of trans-aconitate 3-methyltransferase2 from yeast Resolution 1.12 Å

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		11	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure								.	.	.																																																		.	.	.
Query SS confidence								.	.	.																																																		.	.	.
Query Sequence		A	A	F	G	R	A	.	.	.	A	A	H	Y	E	Q	H	A	D	L	Q	R	Q	S	A	D	A	L	L	A	M	L	P	Q	R	K	Y	T	H	V	L	D	A	G	C	G	P	G	W	M	S	R	H	W	R	E	R	H	A	.	.	.	Q	V	T	A	L	D	L	S	P	P	M	L	V	Q	A	R	Q	K	D
Query Conservation								.	.	.																																																		.	.	.
Alig confidence								.	.	.																																																		.	.	.
Template Conservation
Template Sequence		S	T	F	S	A	S	D	F	N	S	E	R	Y	S	S	S	R	P	S	Y	P	S	D	F	Y	K	X	I	D	E	Y	H	D	G	E	R	K	L	L	V	D	V	G	C	G	P	G	T	A	T	L	Q	X	A	Q	E	L	K	P	F	E	Q	I	I	G	S	D	L	S	A	T	X	I	K	T	A	E	V	I	K
Template Known Secondary structure		G	G	G	G	S	T	T										S																	S			S						T		T	T	T										S	S			S							S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		85	.								.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.							.	140	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.																.	.	.	.	.	.																																						.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.																.	.	.	.	.	.																																						.	.	.	.	.	.
Query Sequence		A	A	.	.	.	.	.	.	.	D	H	Y	L	A	G	D	I	E	S	L	P	L	A	T	.	.	.	.	.	.	A	T	F	D	L	A	W	S	N	L	A	V	Q	W	C	G	N	L	S	T	A	L	R	E	L	Y	R	V	V	R	P	K	G	V	V	A	F	.	.	.	.	.	.	T	T	L	V	Q	G	S
Query Conservation				.	.	.	.	.	.	.																.	.	.	.	.	.																																						.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.																.	.	.	.	.	.																.																						.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		E	G	S	P	D	T	Y	K	N	V	S	F	K	I	S	S	S	D	D	F	K	F	L	G	A	D	S	V	D	K	Q	K	I	D	X	I	T	A	V	E	C	A	H	W	F	.	D	F	E	K	F	Q	R	S	A	Y	A	N	L	R	K	D	G	T	I	A	I	W	G	Y	A	D	P	I	F	P	D	Y	P	E
Template Known Secondary structure				S	T	T	T	T	T	T								T	T			G	G	G		T	T	T	T	T	S	S									S		G	G	G	S	.																														T	T		G	G
Template Predicted Secondary structure																																															.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.							.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																						.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	E	L	H	Q	A	W	Q	A	V	D	E	R	P	H	A	N	R	F	L	P	P	D	E	I	E	Q	S	.	.	.	.	.	.	L	N	G	V	H	Y	Q	H	H	I	Q	P	I	T	L	W	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	L	S	A	M
Query Conservation																															.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	D	L	X	I	E	V	P	Y	G	K	Q	G	L	G	P	Y	W	E	Q	P	G	R	S	R	L	R	N	X	L	K	D	S	H	L	D	P	E	L	F	H	D	I	Q	V	S	Y	F	C	A	E	D	V	R	D	K	V	K	L	H	Q	H	T	K	K	P	L	L	I	R	K	Q	V	T	L	V	E	F	A
Template Known Secondary structure		G	T	T									T	T	T	T	G	G	G	S		T	T							T	T	T	T	T					T	T	T											G	G	G	G	G									S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.							.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.
Query Sequence		R	S	L	K	G	I	G	A	T	H	L	H	E	G	R	D	P	R	I	L	T	R	S	Q	L	Q	R	L	Q	L	.	.	.	.	.	.	A	W	P	Q	Q	Q	G	R	Y	P	L	T	Y	H	L	F	L	G	V	I	A	R
Query Conservation																																.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	V	R	T	W	S	A	Y	H	Q	W	K	Q	D	P	K	N	K	D	K	E	D	V	A	D	W	F	I	K	E	S	L	R	R	R	P	E	L	S	T	N	T	K	I	E	V	V	W	N	T	F	Y	K	L	G	K	R
Template Known Secondary structure					T	T	S										G	G	G	T	T	S																T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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