Return to main results Retrieve Phyre Job Id

Job DescriptionP12999
Confidence99.88%DateThu Jan 5 11:33:17 GMT 2012
Rank20Aligned Residues224
% Identity15%Templatec3e7pA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of of putative methyltransferase from bacteroides2 vulgatus atcc 8482
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30........ .40.........50.........60.... .....70.........80.. .
Predicted Secondary structure 
.












.








......
Query SS confidence 


























.

























.

















. . . . . .
Query Sequence  AFGRAAAHYEQHADLQRQSADALLAML. PQRKYTHVLDAGCGPGWMSRHWRERH. AQVTALDLSPPMLVQARQ. . . . . . K
Query Conservation   
   
  

     
   
  

  
.       








     
    .      
           ...... 
Alig confidence 


























.

























.

















......
Template Conservation            
  

        
  
  
    







 
     

      
 


 
      
         
Template Sequence  LICDFFLNTERQGPGSPEVTLKALSFIDNLTNKSLIADLGCGTGGQTMILAQHVPGKITGIDFFPGFIERFNKNAEKLNL
Template Known Secondary structure  TTSS
SSS

TT




TT
T
TT
S
SS
TT
Template Predicted Secondary structure 





































Template SS confidence 















































































   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   84.....90.........100.........110.........120.........130.........140 .........150.........160
Predicted Secondary structure 


























...








Query SS confidence 
























































. . .



















Query Sequence  DAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTT. . . LVQGSLPELHQAWQAVDERP
Query Conservation                       
 
          
         
 




 
 
  ...        
           
Alig confidence 



































.



















...














.....
Template Conservation                      

 
 
   
      . 

    
 




 
                      .....
Template Sequence  QNRVKGIVGSMDDLSFEKDSLDLIWSEGAIYNIGFE. RGLKEWRNYLKPGGYLAVSESVWFTDQRPAEIHDFWMS. . . . .
Template Known Secondary structure  TTT

TTS



TT
S
GGGT
.GGG
SSS

T.....
Template Predicted Secondary structure 














.











.....
Template SS confidence 















































































   96...100.........110.........120.........130. ........140.........150.........160.........
 
   161........170.........180....... ..190.........200.........210.........220.........230...
Predicted Secondary structure 









.......




















Query SS confidence 


























. . . . . . .













































Query Sequence  HANRFLPPDEIEQSLNGVHYQHHIQPI. . . . . . . TLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQ
Query Conservation                
   
        .......             
   
                    
       
Alig confidence 


























.......




















.....



















Template Conservation                    

                                   .....                    
Template Sequence  AYTEIDTVPNKVAQIQKAGYIPVATFILPENCWIEHYFAPQAKAEEIFRRKHAGS. . . . . RIVEELITSNHHEAELYSKY
Template Known Secondary structure  T
TT
TT

GGGTTTTTTTT
.....
Template Predicted Secondary structure 














.....
Template SS confidence 















































































   170.........180.........190.........200.........210.........220.... .....230.........240....
 
   234.....240.........250
Predicted Secondary structure 

Query SS confidence 
















Query Sequence  QGRYPLTYHLFLGVIAR
Query Conservation   
   

  
   
  
Alig confidence 





....






Template Conservation      

....   
 

Template Sequence  KAYYGY. . . . AFFICKK
Template Known Secondary structure  TTT....
Template Predicted Secondary structure 



....
Template SS confidence 
















   245....250 .......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions