Job Description P12999 Confidence 98.28% Date Thu Jan 5 11:33:17 GMT 2012 Rank 272 Aligned Residues 233 % Identity 16% Template c2eg5C_ PDB info PDB header:transferase Chain: C: PDB Molecule:xanthosine methyltransferase; PDBTitle: the structure of xanthosine methyltransferase Resolution 2.20 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.														.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Query Sequence		A	H	Y	E	Q	H	A	D	L	Q	R	Q	S	A	D	A	L	L	A	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	R	K	Y	T	H	V	L	D	A	G	C	G	P	G	W	M	S	R	H	W	R	E	R	H	A	Q	V	T	A	L	D	L	S	P	P	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	S	Y	A	K	N	S	A	Y	N	Q	L	V	L	A	K	V	K	P	V	L	E	Q	C	V	R	E	L	L	R	A	N	L	P	N	I	N	K	C	I	K	V	A	D	L	G	C	A	S	G	P	N	T	L	L	T	V	R	D	I	V	Q	S	I	D	K	V	G	Q	L	E	R	P	T	I	Q	I	F	L	N
Template Known Secondary structure		S	S	S	T	T	S		S	S																						S			T	T	T	T	T								T			S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
														76	.	.	.	80	.	.											.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	M	L	V	Q	A	R	Q	.	.	.	.	.	.	.	.	.	.	K	D	A	A	D	H	Y	L	A	G	D	I	E	S	L	P	L	A	T	A	T	F	D	L	A	W	S	N	L	A	V	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	F	P	N	D	F	N	S	V	F	K	L	L	P	S	F	Y	R	K	L	E	K	E	N	G	R	K	I	G	S	C	L	I	G	A	M	P	G	S	F	Y	S	R	L	F	P	E	E	S	M	H	F	L	H	S	C	Y	C	L	Q	W	L	S	Q	V	P	S	G	L	V	T	E	L	I	G	T	N	K	G
Template Known Secondary structure				T	T	S								T																T	T	S								S		T	T	S			S		T	T									S		T	T	B		S	S	S		G	G	G	T	T				T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
																						116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.	.	.												.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	G	N	L	S	T	A	L	R	E	L	Y	R	V	V	R	P	K	G	V	V	A	F	T	T	L	V	Q	G	S	.	.	.	.	.	.	.	L	P	E	L	H	Q	A	W	.	.	.	.	.	.	.	.	.	.	.	Q	A	V	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	Y	S	S	K	A	S	R	L	P	V	Q	K	A	Y	L	D	Q	F	T	K	D	F	T	T	F	L	R	I	H	S	E	E	L	F	S	H	G	R	M	L	L	T	C	I	C	K	G	V	E	L	D	A	R	N	A	I	D	L	L	E	M	A	I	N	D	L	V	V	E	G	H	L	E	E	E	K	L	D
Template Known Secondary structure			S	S			T	T	S																																												T	T		B																T	T	S	S		S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.								.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																.	.	.	.	.	.	.
Query SS confidence																								.																.	.	.	.	.	.	.
Query Sequence		E	R	P	H	A	N	R	F	L	P	P	D	E	I	E	Q	S	L	N	G	V	H	.	Y	Q	H	H	I	Q	P	I	T	L	W	F	D	D	A	.	.	.	.	.	.	.	L	S	A	M	R	S	L	K	G	I	G	A	T	H	L	H	E	G	R	D	P	R	I	L	T	R	S	Q	L	Q	R	L	Q	L	A
Query Conservation																								.																.	.	.	.	.	.	.
Alig confidence																								.																.	.	.	.	.	.	.										.
Template Conservation																																																								.
Template Sequence		S	F	N	L	P	V	Y	I	P	S	A	E	E	V	K	C	I	V	E	E	E	G	S	F	E	I	L	Y	L	E	T	F	K	V	L	Y	D	A	G	F	S	H	I	K	A	E	Y	V	A	S	S	V	R	A	.	V	Y	E	P	I	L	A	S	H	F	G	E	A	I	I	P	D	I	F	H	R	F	A	K	H
Template Known Secondary structure		T				S	B																	S													T	T	T	T				T												.												T	T	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	Q	Q	Q	G	R	Y	P	L	T	Y	H	L	F	L	G	V	I	A	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	K	V	L	P	L	G	K	G	F	Y	N	N	L	I	I	S	L	A	K	K
Template Known Secondary structure						G	G	G	T		B
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions