Return to main results Retrieve Phyre Job Id

Job DescriptionP12999
Confidence99.52%DateThu Jan 5 11:33:17 GMT 2012
Rank140Aligned Residues174
% Identity14%Templatec1tw3A_
PDB info PDB header:transferaseChain: A: PDB Molecule:carminomycin 4-o-methyltransferase; PDBTitle: crystal structure of carminomycin-4-o-methyltransferase2 (dnrk) in complex with s-adenosyl-l-homocystein (sah) and3 4-methoxy-e-rhodomycin t (m-et)
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30 .........40.........50.........60.........70.........80
Predicted Secondary structure  .......






















.....
Query SS confidence 

















. . . . . . .

















































. . . . .
Query Sequence  FGRAAAHYEQHADLQRQS. . . . . . . ADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQA. . . . .
Query Conservation 
   
  

     
   .......
  

  
       








     
          
         .....
Alig confidence 

















.......

















































.....
Template Conservation                   
          
           




 
 
     
    
       
       
    
Template Sequence  YEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYL
Template Known Secondary structure  T
TTTTTTTTS

TT
ST
TTS
TT

TT
Template Predicted Secondary structure 



















Template SS confidence 















































































   142.......150.........160.........170.........180.........190.........200.........210.........220.
 
   81........90.........100.........110...... ...120.........130.........140... ......150.....
Predicted Secondary structure 





















..







...

Query SS confidence 



































. .


























. . .











Query Sequence  RQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWC. . GNLSTALRELYRVVRPKGVVAFTTLVQ. . . GSLPELHQAWQA
Query Conservation                          
 
         .. 
         
 




 
 
     ...     
      
Alig confidence 



































..


























...











Template Conservation          
     
         
       
          

      
 
 
 


 
                
 
Template Sequence  KDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDL
Template Known Secondary structure  TT
TTT

TTS

SS
S
GGGS
T

B
GGG

S
Template Predicted Secondary structure 































Template SS confidence 















































































   222.......230.........240.........250.........260.........270.........280.........290.........300.
 
   156...160.........170.........180......
Predicted Secondary structure 













Query SS confidence 






























Query Sequence  VDERPHANRFLPPDEIEQSLNGVHYQHHIQP
Query Conservation                     
   
       
Alig confidence 






























Template Conservation            

  
    
  


    
 
Template Sequence  RMLVFLGGALRTREKWDGLAASAGLVVEEVR
Template Known Secondary structure  S



BTT
Template Predicted Secondary structure 










Template SS confidence 






























   302.......310.........320.........330..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions