Return to main results Retrieve Phyre Job Id

Job DescriptionP12999
Confidence98.90%DateThu Jan 5 11:33:17 GMT 2012
Rank236Aligned Residues117
% Identity23%Templatec1sqgA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sun protein; PDBTitle: the crystal structure of the e. coli fmu apoenzyme at 1.652 a resolution
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60..... ....70.........80.........90. ......
Predicted Secondary structure 














..















......





Query SS confidence 







































. .

























. . . . . .





Query Sequence  LQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHA. . QVTALDLSPPMLVQARQKDAADHYLA. . . . . . GDIESL
Query Conservation   
   
  

  
       








     
     ..     
                    ......      
Alig confidence 







































..

























......





Template Conservation   

 

 
 
  
    
  


 


 
 

  

       
 
 
    

  
     
 
        
      
Template Sequence  VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ
Template Known Secondary structure 

T


TT
S
TT

TT
SSTTTTT




TT
T
Template Predicted Secondary structure 
































Template SS confidence 















































































   230.........240.........250.........260.........270.........280.........290.........300.........
 
   98.100......... 110.........120.........130.........140..
Predicted Secondary structure 







......................






Query SS confidence 











. . . . . . . . . . . . . . . . . . . . . .
































Query Sequence  PLATATFDLAWS. . . . . . . . . . . . . . . . . . . . . . NLAVQWCGNLSTALRELYRVVRPKGVVAFTTLV
Query Conservation         
 
  ......................        
         
 




 
 
    
Alig confidence 











......................
































Template Conservation         
 

 
 



 
     
          
  
   
  

  
   




 






Template Sequence  WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS
Template Known Secondary structure  TT






GGGTTT
TT

TTGGGS
Template Predicted Secondary structure 































Template SS confidence 


































































   310.........320.........330.........340.........350.........360.........370......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions