Return to main results Retrieve Phyre Job Id

Job DescriptionP71301
Confidence97.29%DateThu Jan 5 12:12:45 GMT 2012
Rank97Aligned Residues105
% Identity7%Templatec3crnA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator receiver domain protein, chey-like; PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1
Resolution1.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40......... 50.........60.........70.........80.........90.....
Predicted Secondary structure 












.........















Query SS confidence 
























. . . . . . . . .













































Query Sequence  KYIWSPHDAYFYKGLSELIVDIDRL. . . . . . . . . IYLSLEKIRKDFVFINLSTDSLSEFINRDNEWLSAVKGKQVVLIAA
Query Conservation    

     

  
  
 
      .........    
     
 

 
  
  
                  


 
 
Alig confidence 
























.........













.






.






















Template Conservation 






       
   
   
  
  
     

  
     



.
  

  . 
      
        

  
 
Template Sequence  RILIVDDDTAILDSTKQILEFEGYEVEIAATAGEGLAKIENEFFNLAL. FIKLPDX. EGTELLEKAHKLRPGXKKIXVTG
Template Known Secondary structure 
S
TT
SSS

S.

B
SSS.B
TTSS
Template Predicted Secondary structure 















.






.







Template SS confidence 















































































   3......10.........20.........30.........40.........50 ....... ..60.........70.........80
 
   96...100.........110.........120.........130.
Predicted Secondary structure 









Query SS confidence 



































Query Sequence  RKSEALANYWYYNSNIRGVVYAGLSRDIRKELVYVI
Query Conservation                
   
        
        
Alig confidence 



































Template Conservation               
    
 

     
   
   
Template Sequence  YASLENSVFSLNAGADAYIXKPVNPRDLLEKIKEKL
Template Known Secondary structure 


TT
SSS

Template Predicted Secondary structure 










Template SS confidence 



































   82.......90.........100.........110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions