Return to main results Retrieve Phyre Job Id

Job DescriptionP71301
Confidence97.17%DateThu Jan 5 12:12:45 GMT 2012
Rank105Aligned Residues107
% Identity6%Templatec2zayA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator from desulfuromonas2 acetoxidans
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40......... 50.........60.........70.........80... ......90..
Predicted Secondary structure 













.........









..




Query SS confidence 

























. . . . . . . . .

































. .








Query Sequence  DKYIWSPHDAYFYKGLSELIVDIDRL. . . . . . . . . IYLSLEKIRKDFVFINLSTDSLSEFINRDNEWLS. . AVKGKQVVL
Query Conservation     

     

  
  
 
      .........    
     
 

 
  
  
            ..      


Alig confidence 

























.........





















.










..








Template Conservation   






       
   
   
  
  
     
         
 

 
  

  . 
       
        


 
Template Sequence  WRIMLVDTQLPALAASISALSQEGFDIIQCGNAIEAVPVAVKTHPHLIITEANMPKI. SGMDLFNSLKKNPQTASIPVIA
Template Known Secondary structure 
TTGGGGTSS

SS

SSS.
TSTTTTTS
Template Predicted Secondary structure 
























.










Template SS confidence 















































































   910.........20.........30.........40.........50.........60..... ....70.........80.......
 
   93......100.........110.........120.........130.
Predicted Secondary structure 










Query SS confidence 






































Query Sequence  IAARKSEALANYWYYNSNIRGVVYAGLSRDIRKELVYVI
Query Conservation   
               
   
        
        
Alig confidence 






































Template Conservation   
              
    
 

     
   
   
Template Sequence  LSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKRVL
Template Known Secondary structure  SS

T
SSS

Template Predicted Secondary structure 













Template SS confidence 






































   88.90.........100.........110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions