Return to main results Retrieve Phyre Job Id

Job DescriptionP71301
Confidence95.04%DateThu Jan 5 12:12:45 GMT 2012
Rank167Aligned Residues30
% Identity13%Templatec2uv0G_
PDB info PDB header:transcriptionChain: G: PDB Molecule:transcriptional activator protein lasr; PDBTitle: structure of the p. aeruginosa lasr ligand-binding domain2 bound to its autoinducer
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10....... ..20.........30.
Predicted Secondary structure 

.......









Query SS confidence 















. . . . . . .













Query Sequence  TWQSDYSRDYEVKNHM. . . . . . . ECQNRSDKYIWSPH
Query Conservation   
       
      .......         

   
Alig confidence 















.......













Template Conservation 


  
   
    
   



        
  
   
Template Sequence  NYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPS
Template Known Secondary structure 
S
TTGGGT

SS


GG
Template Predicted Secondary structure 













Template SS confidence 




































   55....60.........70.........80.........90.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions