Return to main results Retrieve Phyre Job Id

Job DescriptionP71301
Confidence74.45%DateThu Jan 5 12:12:45 GMT 2012
Rank339Aligned Residues39
% Identity13%Templatec1b0nA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:protein (sinr protein); PDBTitle: sinr protein/sini protein complex
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170......... 180.........190.....
Predicted Secondary structure 






............



Query SS confidence 






















. . . . . . . . . . . .















Query Sequence  AQGMQPKSIARIENCSVKTVYTH. . . . . . . . . . . . RRNAEAKLYSKIYKLV
Query Conservation    
 
  


  
 

  

  
............   
  


     

Alig confidence 






















............















Template Conservation     


 


   


  


  
 
    
    
  

  
 
    
 
Template Sequence  EKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLL
Template Known Secondary structure  TT

T

TT

S


T

Template Predicted Secondary structure 


















Template SS confidence 


















































   12.......20.........30.........40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions