Return to main results Retrieve Phyre Job Id

Job DescriptionP33128
Confidence100.00%DateThu Jan 5 11:51:09 GMT 2012
Rank10Aligned Residues122
% Identity39%Templated2j2za1
SCOP infoImmunoglobulin-like beta-sandwich PapD-like Pilus chaperone
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50... ......60.........70.........80.........90.........100.. .
Predicted Secondary structure 










.
























.
Query SS confidence 



























.
















































.
Query Sequence  DIVISGTRVIYKSDQKSVNVRLENKGNN. PLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTAST. S
Query Conservation   
 
  



         
 
 
    .  


  
               


 

   
 
   
 


      . 
Alig confidence 



























.













...































.
Template Conservation 

 
  



         
 
 
       


 

      ...      






 

 
     


        
Template Sequence  AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQE. . . KIITGPVIATPPVQRLEPGAKSMVRLSTTPDISK
Template Known Secondary structure 
S
STTSS

SSS

TTS
...SSSS
S
TT

GGGGG
Template Predicted Secondary structure 

















...

















Template SS confidence 















































































   1........10.........20.........30.........40... ......50.........60.........70.......
 
   104.....110.........120.........130.........140.........150.....
Predicted Secondary structure 
























Query SS confidence 



















































Query Sequence  LPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNP
Query Conservation 

 


  
 
 
 


             
 
  
  



 

  
    
Alig confidence 
























.....





















Template Conservation 

 



   
 
  

        .....
 
  
  






  
   
Template Sequence  LPQDRESLFYFNLREIPPRSEKANV. . . . . LQIALQTKIKLFYRPAAIKTRP
Template Known Secondary structure  S
SSS






SS
.....





GGG



Template Predicted Secondary structure 












.....







Template SS confidence 



















































   78.80.........90.........100.. .......110.........120....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions