Return to main results Retrieve Phyre Job Id

Job DescriptionP33128
Confidence100.00%DateThu Jan 5 11:51:09 GMT 2012
Rank12Aligned Residues111
% Identity41%Templated1l4ia1
SCOP infoImmunoglobulin-like beta-sandwich PapD-like Pilus chaperone
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50... ......60.........70.........80.........90.........100....
Predicted Secondary structure 










.


























Query SS confidence 



























.


















































Query Sequence  DIVISGTRVIYKSDQKSVNVRLENKGNN. PLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTASTSL
Query Conservation   
 
  



         
 
 
    .  


  
               


 

   
 
   
 


       
Alig confidence 



























.











.....

































Template Conservation 

 
  



  
      
 
 
       


 
     .....      






 

 
   
 


       
Template Sequence  GVALGATRVIYPEGQKQVQLAVTNNDDKSSYLIQSWIENAE. . . . . GKKDARFVITPPLFSMQGKKENTLRIIDATNGQM
Template Known Secondary structure 
S
STT
S

TT
TT.....S
B
SSSSSS

TT
S
Template Predicted Secondary structure 
















.....


















Template SS confidence 















































































   1........10.........20.........30.........40. ........50.........60.........70.....
 
   105....110.........120.........130.........140.........150.
Predicted Secondary structure 




















Query SS confidence 














































Query Sequence  PKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGL
Query Conservation 
 


  
 
 
 


             
 
  
  



 

  
Alig confidence 
















..........



















Template Conservation 
 



   
 
  

 ..........  
    
  






  
Template Sequence  PEDRESLFWVNVKAIPA. . . . . . . . . . MDLQFAIVSRIKLLYRPQGL
Template Known Secondary structure 
SSS

..........






TT
Template Predicted Secondary structure 





..........




Template SS confidence 














































   76...80.........90.. .......100.........110..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions