Job Description P33128 Confidence 60.74% Date Thu Jan 5 11:51:09 GMT 2012 Rank 45 Aligned Residues 55 % Identity 18% Template c3jt0B_ PDB info PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of the c-terminal fragment (426-558)2 lamin-b1 from homo sapiens, northeast structural genomics3 consortium target hr5546a Resolution 2.39 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	K	S	D	Q	K	S	V	N	V	R	L	E	N	K	G	N	N	P	L	L	V	Q	S	W	L	D	T	G	D	D	N	A	E	P	G	S	I	T	V	P	F	T	A	T	P	P	V	S	R	I	D	A	K	R	G	Q	T	I
Query Conservation
Alig confidence																																				.	.	.	.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		I	E	E	I	D	V	D	G	K	F	I	R	L	K	N	T	S	E	Q	D	Q	P	X	G	G	W	E	X	I	R	K	I	G	D	.	.	.	.	.	T	S	V	S	Y	K	Y	T	S	R	Y	V	L	K	A	G	Q	T	V	T	I
Template Known Secondary structure							T	T	S	S								S	S	S					T	T								T	T	.	.	.	.	.									T	T					T	T
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions