Job Description P33128 Confidence 28.60% Date Thu Jan 5 11:51:09 GMT 2012 Rank 56 Aligned Residues 152 % Identity 11% Template c3fcsA_ PDB info PDB header:cell adhesion/blood clotting Chain: A: PDB Molecule:integrin, alpha 2b; PDBTitle: structure of complete ectodomain of integrin aiibb3 Resolution 2.55 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	V	I	S	G	T	R	V	I	Y	K	S	D	Q	K	.	S	V	N	V	R	L	E	N	K	G	N	N	P	L	L	V	Q	S	W	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	D	D	N	A	E	P	G	S	I	T	V	P	F	T	A	T	P	P	V	S	R
Query Conservation																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		T	A	S	V	T	G	S	P	L	L	V	G	A	D	N	V	L	E	L	Q	M	D	A	A	N	E	G	E	G	A	Y	E	A	E	L	A	V	H	L	P	Q	G	A	H	Y	M	R	A	L	S	N	V	E	F	E	R	L	I	C	N	Q	K	K	E	N	E	T	R	V	V	L	C	E	L	G	N	P	.	.	.
Template Known Secondary structure							S		S			T	T	S														S	S		B	T	T									T	T											.			B								S	S	S	S									T	T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		I	D	A	K	R	G	Q	T	I	K	L	M	Y	T	A	S	T	S	L	P	K	D	R	E	S	V	F	W	F	N	V	L	E	V	P	P	K	P	D	A	E	K	V	A	N	Q	S	L	L	Q	L	A	F	R	T	R	I	K	L	F	Y	R	P	D	G	L	K	G	N	.	.	.	P	S	E	A	P	L	A	L
Query Conservation																																																																							.	.	.
Alig confidence																																			.	.	.																																		.	.	.
Template Conservation																																			.	.	.
Template Sequence		M	K	K	N	A	Q	I	G	I	A	M	L	V	S	V	G	N	L	E	E	A	G	E	S	V	S	F	Q	L	Q	I	R	S	.	.	.	K	N	S	Q	N	P	N	S	K	I	V	L	L	D	V	P	V	R	A	E	A	Q	V	E	L	R	G	N	S	F	P	A	S	L	V	V	A	A	S	W	G	P	K	V
Template Known Secondary structure		B		T	T															T	T			S											.	.	.			S	S	S		S																								S	S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		693	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.				.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	F	W	S	G	S	E	G	K	A	S	L	R	V	T	N	P	T	P	Y	Y	V	S	F	S	S	G	D	L
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.
Template Sequence		E	H	T	.	.	.	.	.	.	.	.	.	Y	E	L	H	N	N	G	P	G	T	V	N	G	L	H	L	S	I
Template Known Secondary structure					.	.	.	.	.	.	.	.	.							S	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.
Template SS confidence
		781	.	.										.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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