Job Description P33128 Confidence 59.92% Date Thu Jan 5 11:51:09 GMT 2012 Rank 46 Aligned Residues 181 % Identity 13% Template c2je8B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-mannosidase; PDBTitle: structure of a beta-mannosidase from bacteroides2 thetaiotaomicron Resolution 1.7 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		S	G	T	R	V	I	Y	K	S	D	Q	K	S	V	N	V	R	L	E	N	K	G	N	N	P	L	.	.	.	L	V	Q	S	W	L	D	T	G	D	D	N	A	E	P	G	S	I	T	V	P	F	T	A	T	P	P	V	S	R	I	D	A	K	R	G	Q	T	I	K	L	M	Y	T	A	S	T	S	L	P	K
Query Conservation																												.	.	.
Alig confidence																												.	.	.																		.	.	.	.	.	.																							.
Template Conservation																																																.	.	.	.	.	.																							.
Template Sequence		A	P	V	L	I	N	P	I	Q	Q	N	D	S	L	S	V	Y	L	I	S	D	R	L	D	T	M	E	Q	M	T	L	E	M	K	V	V	D	F	D	G	K	T	L	G	K	K	.	.	.	.	.	.	I	Q	V	H	S	L	E	V	P	A	N	T	S	K	C	V	Y	R	A	K	L	D	.	G	W	L	T	P
Template Known Secondary structure			S									T	T											S	S														T	T	S							.	.	.	.	.	.										T	T										S	T	.	T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.																							.
Template SS confidence
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.							.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.		.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	E	S	V	F	W	F	N	V	L	E	V	P	P	K	P	D	A	E	K	V	A	N	Q	S	L	L	Q	L	A	F	R	T	R	I	K	L	F	Y	R	P	D	G	L	K	G	N	P	S	E	A	P	L	A	L	K	W	F	W	S	G	S	E	G	K	A	S	L	R	V	T	N	P	T	P	Y	Y	V	S
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.																																			.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.																																			.	.
Template Sequence		E	D	C	R	R	S	F	L	K	L	I	L	K	.	.	.	.	.	.	.	.	.	.	D	K	S	G	H	Q	V	A	E	S	V	H	F	.	.	.	.	.	.	F	R	K	T	K	D	L	Q	L	P	P	T	S	V	S	Y	Q	M	K	Q	T	D	G	K	C	E	L	T	L	F	S	S	M	L	.	.	A	K
Template Known Secondary structure					T	T									.	.	.	.	.	.	.	.	.	.		T	T											.	.	.	.	.	.	S	S		G	G	G	S															T	T									S	S		.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.																																			.	.
Template SS confidence
		750	.	.	.	.	.	.	.	.	.	760	.	.											.	.	.	.	.	.	.	770	.	.	.	.	.							.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.			810	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		F	S	S	G	D	L	E	A	S	G	K	R	Y	P	I	D	V	K	M	I	A	P	F	S	D	E	V	M	K	V	N	.	G	L	N	G	K	A	N	S	A	K	V	H	F	Y	A	I	N	D
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		D	I	F	I	E	T	P	L	Q	G	A	R	Y	S	D	N	F	F	D	L	L	P	G	E	R	K	K	V	I	I	T	S	P	R	I	K	K	G	E	E	L	P	V	N	I	K	H	I	R	E
Template Known Secondary structure								S	S	T	T				S			S					T	T										T	T			T	T	S									G	G	G
Template Predicted Secondary structure
Template SS confidence
		812	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions