 |
Job Description | P33128 | Confidence | 95.26% | Date | Thu Jan 5 11:51:09 GMT 2012 |
Rank | 24 | Aligned Residues | 85 |
% Identity | 19% | Template | c2e6jA_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:hydin protein; |
PDBTitle: solution structure of the c-terminal papd-like domain from2 human hydin protein
|
Resolution | UNK |
|
 |
  |   |
27 | . | . | 30 | . | . | . | . | . | . | |
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | I | S | G | T | R | V | I | Y | . |
. |
. |
. |
K | S | D | Q | K | S | V | N | V | R | L | E | N | K | G | N | N | P | L | L | V | Q | S | W | L | D | T | G | D | D | N | A | E | P | G | S | I | T | V | P | F | T | A | T | P | P | V | S | R | I | D | A | K | R | G | Q | T | I | K | L | M | Y | T | A | S | T |
Query Conservation |   |
|   |
|   |   |
|
|
|
|   | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |
|   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |
|   |   |   |   |   |
|   |
|   |
|   |
|   |   |
Template Sequence |   |
I | H | F | N | F | E | L | L | D | I | G | K | V | F | T | G | S | A | H | C | Y | E | A | I | L | Y | N | K | G | S | I | D | A | L | F | N | M | . |
. |
. |
. |
. |
. |
. |
T | P | P | T | S | A | L | G | A | C | F | V | F | S | P | K | E | G | I | I | E | P | S | G | V | Q | A | I | Q | I | S | F | S | S | I | I |
Template Known Secondary structure |   |
 |  |  | S |
| S |  |  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  | . | . | . | . | . | . | . |
|
|
| S | S |  |  |  |  |  |
|  |  |  | S | S |  |  |  |  |
| T | T | B |
|
|  |  |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | P | K | D | R | E | S | V | F | W | F | N | V | L | E | V | P |
Query Conservation |   |
  |
|
|   |
|
|
|   |   |
|   |
|   |
|   |
|
|
|
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
. |
. |
L | G | N | F | E | E | E | F | L | V | N | V | N | G | S | P |
Template Known Secondary structure |   |
. | . |
|  |  |  |  |  |  |  |
|  |  |  | S | S |
| S |
Template Predicted Secondary structure |   |
. | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|