Job Description P33128 Confidence 100.00% Date Thu Jan 5 11:51:09 GMT 2012 Rank 3 Aligned Residues 194 % Identity 31% Template c1z9sA_ PDB info PDB header:chaperone/immune system Chain: A: PDB Molecule:chaperone protein caf1m; PDBTitle: crystal structure of the native chaperone:subunit:subunit2 caf1m:caf1:caf1 complex Resolution 2.20 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	I	A	D	I	V	I	S	G	T	R	V	I	Y	K	S	D	Q	K	S	V	N	V	R	L	E	N	K	G	N	N	P	L	L	V	Q	S	W	L	D	T	G	D	D	N	A	E	P	G	S	I	T	V	P	F	T	A	T	P	P	V	S	R	I	D	A	K	R	G	Q	T	I	K	L	M	Y	T	A	S
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.																										.
Template Conservation																																																	.	.	.	.	.	.	.																										.
Template Sequence		S	K	E	Y	G	V	T	I	G	E	S	R	I	I	Y	P	L	D	A	A	G	V	M	V	S	V	K	N	T	Q	D	Y	P	V	L	I	Q	S	R	I	Y	D	E	N	K	E	K	.	.	.	.	.	.	.	P	F	V	V	T	P	P	L	F	R	L	D	A	K	Q	Q	N	S	L	R	I	A	Q	A	G	.
Template Known Secondary structure										S	S	S						T	T		S										S	S	S											T	T	S			.	.	.	.	.	.	.						S	S						T	T											S	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.																										.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	P	K	D	R	E	S	V	F	W	F	N	V	L	E	V	P	P	K	P	D	A	E	K	V	A	N	Q	S	L	L	Q	L	A	F	R	T	R	I	K	L	F	Y	R	P	D	G	L	K	G	N	P	S	E	A	P	L	A	L	K	W	F	W	S	G	S	E	G	K	A	S	L	R	V	T	N	P	T
Query Conservation
Alig confidence																						.	.	.	.	.	.	.																																											.	.	.	.
Template Conservation																						.	.	.	.	.	.	.																																											.	.	.	.
Template Sequence		G	V	F	P	R	D	K	E	S	L	K	W	L	C	V	K	G	I	P	P	.	.	.	.	.	.	.	D	V	G	V	F	V	Q	F	A	I	N	N	C	I	K	L	L	V	R	P	N	E	L	K	G	T	P	I	Q	F	A	E	N	L	S	W	K	V	D	G	G	K	.	.	.	.	L	I	A	E	N	P	S
Template Known Secondary structure						S	S	S														.	.	.	.	.	.	.																					T	T	S		S		G	G	G	T	G	G	G							T	T		.	.	.	.							S
Template Predicted Secondary structure																						.	.	.	.	.	.	.																																											.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.								.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		P	Y	Y	V	S	F	S	S	G	D	L	E	A	S	G	K	R	Y	P	I	D	V	K	M	I	A	P	F	S	D	E	V	M	K	V	N	G	L	N	G	K	A	N	S	A	K	V	H	F	Y	A	I	N	D	F	G	G	A	I	E	.	G	N	A	R	L
Query Conservation																																																														.
Alig confidence																	.	.	.	.																			.	.	.	.	.	.	.	.																.
Template Conservation																	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		P	F	Y	M	N	I	G	E	L	T	F	G	G	K	S	.	.	.	.	I	P	S	H	Y	I	P	P	K	S	T	W	A	F	D	L	A	R	.	.	.	.	.	.	.	.	N	V	S	W	R	I	I	N	D	Q	G	G	L	D	R	L	Y	S	K	N	V
Template Known Secondary structure		S	S										T	T			.	.	.	.								T	T										.	.	.	.	.	.	.	.							B		T	T	S		B
Template Predicted Secondary structure																	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.									.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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