Job Description P33128 Confidence 100.00% Date Thu Jan 5 11:51:09 GMT 2012 Rank 6 Aligned Residues 194 % Identity 35% Template c1qpxA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:papd chaperone; PDBTitle: crystal structures of self-capping papd chaperone homodimers Resolution 2.40 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.
Predicted Secondary structure																														.																																																		.
Query SS confidence																														.																																																		.
Query Sequence		D	I	V	I	S	G	T	R	V	I	Y	K	S	D	Q	K	S	V	N	V	R	L	E	N	K	G	N	N	.	P	L	L	V	Q	S	W	L	D	T	G	D	D	N	A	E	P	G	S	I	T	V	P	F	T	A	T	P	P	V	S	R	I	D	A	K	R	G	Q	T	I	K	L	M	Y	T	A	S	T	.	S
Query Conservation																														.																																																		.
Alig confidence																														.															.	.	.																																	.
Template Conservation																																													.	.	.
Template Sequence		A	V	S	L	D	R	T	R	A	V	F	D	G	S	E	K	S	M	T	L	D	I	S	N	D	N	K	Q	L	P	Y	L	A	Q	A	W	I	E	N	E	N	Q	E	.	.	.	K	I	I	T	G	P	V	I	A	T	P	P	V	Q	R	L	D	P	G	A	K	S	M	V	R	L	S	T	T	P	D	I	S	K
Template Known Secondary structure						S		S						T	T	S	S											S	S	S											T	T	S		.	.	.			S	S	S	S					S	S						T	T											G	G	G	G	G
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		L	P	K	D	R	E	S	V	F	W	F	N	V	L	E	V	P	P	K	P	D	A	E	K	V	A	N	Q	S	L	L	Q	L	A	F	R	T	R	I	K	L	F	Y	R	P	D	G	L	K	G	N	P	S	E	A	P	L	.	A	L	K	W	F	W	S	G	S	E	G	K	A	S	L	R	V	T	N	P	T	P
Query Conservation																																																											.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.											.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		L	P	Q	D	R	E	S	L	F	Y	F	N	L	R	E	I	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	L	C	T	K	I	K	L	F	Y	R	P	A	A	I	K	T	R	P	N	E	V	W	Q	D	Q	L	I	L	N	K	V	S	G	G	.	.	.	.	Y	R	I	E	N	P	T	P
Template Known Secondary structure		S		S	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.														G	G	G				T	T				G	G	G							T	T		.	.	.	.							S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.															.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		Y	Y	V	S	F	S	S	G	D	L	E	A	S	G	K	R	Y	.	P	I	D	V	K	M	I	A	P	F	S	D	E	V	M	K	V	N	G	L	N	G	K	A	N	S	A	K	V	H	F	Y	A	I	N	D	F	G	G	A	I	E	G	N	A	R	L
Query Conservation																			.
Alig confidence																			.																				.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.
Template Sequence		Y	Y	V	T	V	I	G	L	G	G	S	E	K	Q	A	E	E	G	E	F	E	T	V	M	L	S	P	R	S	E	Q	T	V	K	S	A	N	.	.	.	.	.	.	Y	N	T	P	Y	L	S	Y	I	N	D	Y	G	G	R	P	V	L	S	F	I	C
Template Known Secondary structure		S									S	S							S									T	T										.	.	.	.	.	.		S	S								T	T	S
Template Predicted Secondary structure																																							.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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